CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ANCCAN_01421 *(Ancylostoma caninum)* Paired box
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00292 (PAX)	IPR001523	ANCCAN_01421	T312493_2.00	WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
pax2b M02425_2.00	Danio rerio	HVNYSRNSCR	YGSNYSRNBD	PBM Weirauch et al.(2014) pTH8679	0.800	0.800
Pax5B M01301_2.00	Gallus gallus	NSNDTNNNN	NNNNAHNSN	PBM Lambert et al.(2019) pTH9781	0.800	0.800
pax2 M02428_2.00	Xenopus tropicalis	NNNRNBCRNN	NNYGVNYNNN	PBM Weirauch et al.(2014) pTH8556	0.800	0.800
PAX5 M03443_2.00	Homo sapiens	RNBYANYSAWSCGTRACN	NGTYACGSWTSRNTRVNY	SELEX Jolma et al.(2013) PAX5_1	0.800	0.800
PAX5 M08160_2.00	Homo sapiens	RDGCGTGACCNN	NNGGTCACGCHY	ChIP-seq Mathelier et al.(2014) MA0014.3	0.800	0.800
PAX5 M07995_2.00	Homo sapiens	BCAVYSRDSCRKRRC	GYYMYGSHYSRBTGV	ChIP-seq Gerstein et al.(2012) GM12878_PAX5C20_HudsonAlpha	0.800	0.800
PAX5 M07996_2.00	Homo sapiens	BCASYSRDSCRTRAC	GTYAYGSHYSRSTGV	ChIP-seq Gerstein et al.(2012) GM12878_PAX5N19_HudsonAlpha	0.800	0.800
PAX5 M07997_2.00	Homo sapiens	CASYSRDSCRKRACN	NGTYMYGSHYSRSTG	ChIP-seq Gerstein et al.(2012) GM12891_PAX5C20_HudsonAlpha	0.800	0.800
PAX5 M07998_2.00	Homo sapiens	BCASYSRDSCGKRRC	GYYMCGSHYSRSTGV	ChIP-seq Gerstein et al.(2012) GM12892_PAX5C20_HudsonAlpha	0.800	0.800
PAX5 M08227_2.00	Homo sapiens	BCANYSRDGCGTRAM	KTYACGCHYSRNTGV	ChIP-seq Contrino et al.(2012) Mv108	0.800	0.800
PAX5 M08228_2.00	Homo sapiens	AGCGTGRCYG	CRGYCACGCT	ChIP-seq Contrino et al.(2012) Mv109	0.800	0.800
PAX5 M09341_2.00	Homo sapiens	SNVDGNKCARCVRAGCRDGAC	GTCHYGCTYBGYTGMNCHBNS	Misc Kulakovskiy et al.(2013) PAX5_HUMAN.H11MO.0.A	0.800	0.800
Pax5 M09342_2.00	Mus musculus	VDRNBCAVYVRDSCRKRRM	KYYMYGSHYBRBTGVNYHB	Misc Kulakovskiy et al.(2013) PAX5_MOUSE.H11MO.0.A	0.800	0.800
PAX5 M09622_2.00	Homo sapiens	BCASYSRDSCRTGRMN	NKYCAYGSHYSRSTGV	Misc Heinz et al.(2010) GM12878-PAX5_GSE32465_1	0.800	0.800
PAX5 M09623_2.00	Homo sapiens	BCABNVRSCGTGAC	GTCACGSYBNVTGV	Misc Heinz et al.(2010) GM12878-PAX5_GSE32465_2	0.800	0.800
PAX5 M11208_2.00	Homo sapiens	BCNNNRNKCANBGNWGNRKRGMSRSHNB	VNDSYSKCYMYNCWNCVNTGMNYNNNGV	Transfac Matys et al.(2006) V$PAX5_01	0.800	0.800
PAX5 M11209_2.00	Homo sapiens	VRHVDGDNDBBTNRAGCGKRACVRYNVH	DBNRYBGTYMCGCTYNAVVHNHCHBDYB	Transfac Matys et al.(2006) V$PAX5_02	0.800	0.800
PAX5 M11210_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PAX5_06	0.800	0.800
PAX5 M11211_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PAX5_07	0.800	0.800
PAX5 M11212_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PAX5_Q6	0.800	0.800
sv M01302_2.00	Drosophila melanogaster	NNNSCRBRDM	KHYVYGSNNN	PBM Lambert et al.(2019) pTH9773	0.780	0.780
sv M03949_2.00	Drosophila melanogaster	NBCRNYSAWGCGTGACS	SGTCACGCWTSRNYGVN	SELEX Nitta et al.(2015) sv_1	0.780	0.780
sv M06438_2.00	Drosophila melanogaster	RNYSRDSCGTRACNN	NNGTYACGSHYSRNY	B1H Zhu et al.(2011) sv_SOLEXA_5_FBgn0005561	0.780	0.780
pax-2 M00706_2.00	Caenorhabditis elegans	RMSCRTRACS	SGTYAYGSKY	PBM Narasimhan et al.(2015) pTH10794	0.720	0.720
PAX8 M05685_2.00	Homo sapiens	NRNBYRNYSRWGCGTGACSN	NSGTCACGCWYSRNYRVNYN	SELEX Yin et al.(2017) PAX8_FL_HT-SELEX	0.720	0.720
Pax8 M09624_2.00	Rattus norvegicus	BCAGBCADSCRKGVM	KBCMYGSHTGVCTGV	Misc Heinz et al.(2010) Thyroid-Pax8_GSE26938	0.720	0.720
PAX8 M11205_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PAX8_01	0.720	0.720
PAX8 M11206_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PAX8_B	0.720	0.720
PAX8 M05686_2.00	Homo sapiens	NRNBCRNTSAWSCGYGACNN	NNGTCRCGSWTSANYGVNYN	SELEX Yin et al.(2017) PAX8_FL_Methyl-HT-SELEX	0.720	0.720
PAX7 M00346_2.00	Homo sapiens	NGTYAYGSHN	NDSCRTRACN	PBM Barrera et al.(2016) PAX7_REF	0.700	0.700
Poxn M03946_2.00	Drosophila melanogaster	DGCGTGACSGTCACGSY	RSCGTGACSGTCACGCH	SELEX Nitta et al.(2015) Poxn_1	0.700	0.700
Poxn M03947_2.00	Drosophila melanogaster	RSCGKGACSGTTMCGSW	WSCGKAACSGTCMCGSY	SELEX Nitta et al.(2015) Poxn_2	0.700	0.700
Poxn M03948_2.00	Drosophila melanogaster	NCGTTCCGGAACGD	HCGTTCCGGAACGN	SELEX Nitta et al.(2015) Poxn_3	0.700	0.700
Poxn M06437_2.00	Drosophila melanogaster	RSCGTGACG	CGTCACGSY	B1H Zhu et al.(2011) Poxn_SOLEXA_5_FBgn0003130	0.700	0.700
PAX7 M00345_2.00	Homo sapiens	NSGTCACGSN	NSCGTGACSN	PBM Barrera et al.(2016) PAX7_P112L	0.700	0.700
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ANCCAN_01421	Paired box	51	100	GHTGVNQLGGVFVNGRPLPDHIRGRIVEMAHQGVRPCDISRQLRWSGEIG

Links
Other Paired box family TFs
Other *Ancylostoma caninum* TFs

286 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ENSAMEG00000011505	Ailuropoda melanoleuca	ENSAMEG00000011505	N	0.000
ZNF292	Bos taurus	ENSBTAG00000046612	N	0.000
ZNF292	Canis familiaris	ENSCAFG00000003045	N	0.000
ZNF292	Choloepus hoffmanni	ENSCHOG00000003324	N	0.000
ZNF292	Callithrix jacchus	ENSCJAG00000000634	N	0.000
ZNF292	Cavia porcellus	ENSCPOG00000008644	N	0.000
ENSCSAG00000017359	Chlorocebus sabaeus	ENSCSAG00000017359	N	0.000
ZNF292	Dasypus novemcinctus	ENSDNOG00000045555	N	0.000
ZNF292	Equus caballus	ENSECAG00000018906	N	0.000
ZNF292	Felis catus	ENSFCAG00000000698	N	0.000
ZNF292	Homo sapiens	ENSG00000188994	N	0.000
ZNF292	Loxodonta africana	ENSLAFG00000007712	N	0.000
ENSMICG00000008856	Microcebus murinus	ENSMICG00000008856	N	0.000
ZNF292	Myotis lucifugus	ENSMLUG00000002535	N	0.000
ZNF292	Macaca mulatta	ENSMMUG00000022458	N	0.000
ENSMPUG00000009584	Mustela putorius furo	ENSMPUG00000009584	N	0.000
ENSNLEG00000012921	Nomascus leucogenys	ENSNLEG00000012921	N	0.000
ENSOARG00000013132	Ovis aries	ENSOARG00000013132	N	0.000
ZNF292	Otolemur garnettii	ENSOGAG00000031301	N	0.000
ENSP00000358590	Macaca fascicularis	ENSP00000358590	N	0.000
ENSP00000358590-D1	Bos grunniens	ENSP00000358590-D1	N	0.000
ENSPANG00000007401	Papio anubis	ENSPANG00000007401	N	0.000
ENSPPYG00000016824	Pongo abelii	ENSPPYG00000016824	N	0.000
ZNF292	Pan troglodytes	ENSPTRG00000018400	N	0.000
Zfp292	Rattus norvegicus	ENSRNOG00000031031	N	0.000
ZNF292	Sorex araneus	ENSSARG00000004191	N	0.000
ENSSTOG00000025840	Ictidomys tridecemlineatus	ENSSTOG00000025840	N	0.000
ZNF292	Tupaia belangeri	ENSTBEG00000016177	N	0.000
ENSTSYG00000012884	Tarsius syrichta	ENSTSYG00000012884	N	0.000
Myotis_brandtii_ZNF292_10002981	Myotis brandtii	Myotis_brandtii_ZNF292_10002981	N	0.000

ANCCAN_01421 (Ancylostoma caninum) Paired box

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

286 Related TFs

ANCCAN_01421 **(Ancylostoma caninum)
Paired box**