ANCDUO_11516 (Ancylostoma duodenale)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 ANCDUO_11516 T312529_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pax5B
M01301_2.00 		Gallus gallus
NSNDTNNNN
NNNNAHNSN		 PBM
Lambert et al.(2019)
pTH9781 		0.750 0.750
egl-38
M02426_2.00 		Caenorhabditis elegans
ACCGTGAYCAC
GTGRTCACGGT		 PBM
Weirauch et al.(2014)
pTH8981 		0.750 0.750
pax-2
M00706_2.00 		Caenorhabditis elegans
RMSCRTRACS
SGTYAYGSKY		 PBM
Narasimhan et al.(2015)
pTH10794 		0.750 0.750
PAX5
M03443_2.00 		Homo sapiens
RNBYANYSAWSCGTRACN
NGTYACGSWTSRNTRVNY		 SELEX
Jolma et al.(2013)
PAX5_1 		0.750 0.750
PAX5
M08160_2.00 		Homo sapiens
RDGCGTGACCNN
NNGGTCACGCHY		 ChIP-seq
Mathelier et al.(2014)
MA0014.3 		0.750 0.750
PAX5
M07995_2.00 		Homo sapiens
BCAVYSRDSCRKRRC
GYYMYGSHYSRBTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha 		0.750 0.750
PAX5
M07996_2.00 		Homo sapiens
BCASYSRDSCRTRAC
GTYAYGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha 		0.750 0.750
PAX5
M07997_2.00 		Homo sapiens
CASYSRDSCRKRACN
NGTYMYGSHYSRSTG		 ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha 		0.750 0.750
PAX5
M07998_2.00 		Homo sapiens
BCASYSRDSCGKRRC
GYYMCGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha 		0.750 0.750
PAX5
M08227_2.00 		Homo sapiens
BCANYSRDGCGTRAM
KTYACGCHYSRNTGV		 ChIP-seq
Contrino et al.(2012)
Mv108 		0.750 0.750
PAX5
M08228_2.00 		Homo sapiens
AGCGTGRCYG
CRGYCACGCT		 ChIP-seq
Contrino et al.(2012)
Mv109 		0.750 0.750
PAX5
M09341_2.00 		Homo sapiens
SNVDGNKCARCVRAGCRDGAC
GTCHYGCTYBGYTGMNCHBNS		 Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A 		0.750 0.750
Pax5
M09342_2.00 		Mus musculus
VDRNBCAVYVRDSCRKRRM
KYYMYGSHYBRBTGVNYHB		 Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A 		0.750 0.750
PAX5
M09622_2.00 		Homo sapiens
BCASYSRDSCRTGRMN
NKYCAYGSHYSRSTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1 		0.750 0.750
PAX5
M09623_2.00 		Homo sapiens
BCABNVRSCGTGAC
GTCACGSYBNVTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2 		0.750 0.750
PAX5
M11208_2.00 		Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB
VNDSYSKCYMYNCWNCVNTGMNYNNNGV		 Transfac
Matys et al.(2006)
V$PAX5_01 		0.750 0.750
PAX5
M11209_2.00 		Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH
DBNRYBGTYMCGCTYNAVVHNHCHBDYB		 Transfac
Matys et al.(2006)
V$PAX5_02 		0.750 0.750
PAX5
M11210_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_06 		0.750 0.750
PAX5
M11211_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_07 		0.750 0.750
PAX5
M11212_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_Q6 		0.750 0.750
sv
M01302_2.00 		Drosophila melanogaster
NNNSCRBRDM
KHYVYGSNNN		 PBM
Lambert et al.(2019)
pTH9773 		0.734 0.734
sv
M03949_2.00 		Drosophila melanogaster
NBCRNYSAWGCGTGACS
SGTCACGCWTSRNYGVN		 SELEX
Nitta et al.(2015)
sv_1 		0.734 0.734
sv
M06438_2.00 		Drosophila melanogaster
RNYSRDSCGTRACNN
NNGTYACGSHYSRNY		 B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561 		0.734 0.734
pax2b
M02425_2.00 		Danio rerio
HVNYSRNSCR
YGSNYSRNBD		 PBM
Weirauch et al.(2014)
pTH8679 		0.719 0.719
pax2
M02428_2.00 		Xenopus tropicalis
NNNRNBCRNN
NNYGVNYNNN		 PBM
Weirauch et al.(2014)
pTH8556 		0.719 0.719
PAX8
M05685_2.00 		Homo sapiens
NRNBYRNYSRWGCGTGACSN
NSGTCACGCWYSRNYRVNYN		 SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX 		0.719 0.719
Pax8
M09624_2.00 		Rattus norvegicus
BCAGBCADSCRKGVM
KBCMYGSHTGVCTGV		 Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938 		0.719 0.719
PAX8
M11205_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX8_01 		0.719 0.719
PAX8
M11206_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX8_B 		0.719 0.719
PAX8
M05686_2.00 		Homo sapiens
NRNBCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGVNYN		 SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX 		0.719 0.719
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ANCDUO_11516 Paired box 14 77

Links

Other Paired box family TFs
Other Ancylostoma duodenale TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003197 Calypte anna Aan_R003197 I
Afo_R015956 Aptenodytes forsteri Afo_R015956 I
Cmyd_10011837 Chelonia mydas Cmyd_10011837 I
NPAS2 Anolis carolinensis ENSACAG00000007946 I
ENSAPLG00000016315 Anas platyrhynchos ENSAPLG00000016315 I
NPAS2 Bos taurus ENSBTAG00000019697 I
NPAS2 Canis familiaris ENSCAFG00000002223 I
NPAS2 Choloepus hoffmanni ENSCHOG00000008122 I
NPAS2 Callithrix jacchus ENSCJAG00000021202 I
ENSCPOG00000002470 Cavia porcellus ENSCPOG00000002470 I
ENSCSAG00000017176 Chlorocebus sabaeus ENSCSAG00000017176 I
NPAS2 Dasypus novemcinctus ENSDNOG00000002520 I
ENSDORG00000015727 Dipodomys ordii ENSDORG00000015727 I
NPAS2 Equus caballus ENSECAG00000000171 I
NPAS2 Echinops telfairi ENSETEG00000008221 I
ENSFALG00000003827 Ficedula albicollis ENSFALG00000003827 I
NPAS2 Felis catus ENSFCAG00000005306 I
NPAS2 Homo sapiens ENSG00000170485 D
NPAS2 Gallus gallus ENSGALG00000016774 I
NPAS2 Gorilla gorilla ENSGGOG00000006420 I
ENSLACG00000011834 Latimeria chalumnae ENSLACG00000011834 I
NPAS2 Loxodonta africana ENSLAFG00000016336 I
ENSMEUG00000000949 Macropus eugenii ENSMEUG00000000949 I
NPAS2 Meleagris gallopavo ENSMGAG00000014799 I
NPAS2 Microcebus murinus ENSMICG00000016027 I
NPAS2 Macaca mulatta ENSMMUG00000009871 I
ENSMMUP00000012928 Macaca fascicularis ENSMMUP00000012928 I
NPAS2 Monodelphis domestica ENSMODG00000001691 I
ENSMPUG00000012117 Mustela putorius furo ENSMPUG00000012117 I
Npas2 Mus musculus ENSMUSG00000026077 D
ENSNLEG00000014404 Nomascus leucogenys ENSNLEG00000014404 I
ENSOANG00000022558 Ornithorhynchus anatinus ENSOANG00000022558 I
ENSOARG00000013285 Ovis aries ENSOARG00000013285 I
NPAS2 Oryctolagus cuniculus ENSOCUG00000002384 I
NPAS2 Otolemur garnettii ENSOGAG00000014490 I
ENSP00000338283-D1 Bos grunniens ENSP00000338283-D1 I
ENSPANG00000000546 Papio anubis ENSPANG00000000546 I
NPAS2 Procavia capensis ENSPCAG00000004689 I
ENSPPYG00000012101 Pongo abelii ENSPPYG00000012101 I
NPAS2 Pan troglodytes ENSPTRG00000012287 I
Npas2 Rattus norvegicus ENSRNOG00000013408 I
ENSSHAG00000010526 Sarcophilus harrisii ENSSHAG00000010526 I
NPAS2 Sus scrofa ENSSSCG00000008171 I
ENSSTOG00000008934 Ictidomys tridecemlineatus ENSSTOG00000008934 I
NPAS2 Tupaia belangeri ENSTBEG00000012008 I
NPAS2 Taeniopygia guttata ENSTGUG00000010003 I
ENSTSYG00000005382 Tarsius syrichta ENSTSYG00000005382 I
NPAS2 Tursiops truncatus ENSTTRG00000016446 I
NPAS2 Vicugna pacos ENSVPAG00000001242 I
Gfo_R005610 Geospiza fortis Gfo_R005610 I
Ogr16001 Ophisaurus gracilis Ogr16001 I
Pvit_02251 Pogona vitticeps Pvit_02251 I
Tal_R012319 Tyto alba Tal_R012319 I