LCORL (Gallus gallus)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSGALG00000014421 T313559_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LCORL
M01304_2.00 		Homo sapiens
HYNAAWHN
NDWTTNRD		 PBM
Lambert et al.(2019)
pTH11267 		1.000 1.000
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGALP00000028143 Pipsqueak 275 312
ENSGALP00000028143 Pipsqueak 524 569

Links

Other Pipsqueak family TFs
Other Gallus gallus TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
COCC4DRAFT_64454 Bipolaris maydis COCC4DRAFT_64454 N 0.000
COCMIDRAFT_38738 Bipolaris oryzae COCMIDRAFT_38738 N 0.000
COCVIDRAFT_18570 Bipolaris victoriae COCVIDRAFT_18570 N 0.000
CPUR_08234 Claviceps purpurea CPUR_08234 N 0.000
fgenesh1_pg.sca_11_chr8_3_0000196 Nectria haematococca fgenesh1_pg.sca_11_chr8_3_0000196 N 0.000
NechaG84128 Fusarium solani NechaG84128 N 0.000
SETTUDRAFT_165750 Setosphaeria turcica SETTUDRAFT_165750 N 0.000