LCORL (Sus scrofa)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSSSCG00000008748 T313618_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LCORL
M01304_2.00 		Homo sapiens
HYNAAWHN
NDWTTNRD		 PBM
Lambert et al.(2019)
pTH11267 		1.000 1.000
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSSCP00000009324 Pipsqueak 278 315
ENSSSCP00000009324 Pipsqueak 527 572

Links

Other Pipsqueak family TFs
Other Sus scrofa TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CPUR_05105 Claviceps purpurea CPUR_05105 N
F503_02724 Ophiostoma piceae uamh F503_02724 N
FFUJ_05571 Fusarium fujikuroi FFUJ_05571 N
FOXG_15657 Fusarium oxysporum FOXG_15657 N
FPSE_08332 Fusarium pseudograminearum FPSE_08332 N
FVEG_13117 Fusarium verticillioides FVEG_13117 N
GLRG_07211 Colletotrichum graminicola GLRG_07211 N
HCBG_07254 Histoplasma capsulatum HCBG_07254 N
HMPREF1120_04133 Exophiala dermatitidis HMPREF1120_04133 N
MAM_05134 Metarhizium album MAM_05134 N
OCS_06132 Ophiocordyceps sinensis OCS_06132 N
OIDMADRAFT_120194 Oidiodendron maius OIDMADRAFT_120194 N
PEX1_051210 Penicillium expansum PEX1_051210 N
PODANS_3_4320 Podospora anserina PODANS_3_4320 N
UV8b_2725 Ustilaginoidea virens UV8b_2725 N
W97_07560 Coniosporium apollinis W97_07560 N
X797_009461 Metarhizium robertsii X797_009461 N