HMEL008789 (Heliconius melpomene)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 HMEL008789 T313813_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bab1
M06440_2.00 		Drosophila melanogaster
AAYAWWWATA
TATWAWTRTT		 B1H
Zhu et al.(2011)
bab1_FlyReg_FBgn0004870 		1.000 1.000
bab1
M06441_2.00 		Drosophila melanogaster
KAATTAWATAW
WTATWTAATTM		 B1H
Zhu et al.(2011)
bab1_SANGER_5_FBgn0004870 		1.000 1.000
bab1
M09690_2.00 		Drosophila melanogaster
AHWAYWATAWAHAT
ATDTWTATWRTWDT		 Misc
Kulakovskiy et al.(2009)
bab1 		1.000 1.000
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HMEL008789-PA Pipsqueak 45 90

Links

Other Pipsqueak family TFs
Other Heliconius melpomene TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N
SCL5 Arabidopsis thaliana AT1G50600 N
Bo6g022330 Brassica oleracea Bo6g022330 N
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N
Bra018860 Brassica rapa Bra018860 N
Bra026077 Brassica rapa Bra026077 N
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N
Carubv10008830m.g Capsella rubella Carubv10008830m.g N
cassava34699.m1 Manihot esculenta cassava34699.m1 N
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N
TCM_030733 Theobroma cacao TCM_030733 N
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N