Brh_R013202 (Buceros rhinoceros)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 Brh_R013202 T314419_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LCORL
M01304_2.00 		Homo sapiens
HYNAAWHN
NDWTTNRD		 PBM
Lambert et al.(2019)
pTH11267 		1.000 1.000
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R013202 Pipsqueak 226 263
Brh_R013202 Pipsqueak 475 520

Links

Other Pipsqueak family TFs
Other Buceros rhinoceros TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB003620 Anopheles albimanus AALB003620 N 0.000
AATE015248 Anopheles atroparvus AATE015248 N 0.000
ACEP14712 Atta cephalotes ACEP14712 N 0.000
ACYPI007360 Acyrthosiphon pisum ACYPI007360 N 0.000
ACYPI061631 Acyrthosiphon pisum ACYPI061631 N 0.000
AFAF019448 Anopheles farauti AFAF019448 N 0.000
Afo_R004423 Aptenodytes forsteri Afo_R004423 N 0.000
Afo_R004424 Aptenodytes forsteri Afo_R004424 N 0.000
AMAM017394 Anopheles maculatus AMAM017394 N 0.000
AMEM018396 Anopheles merus AMEM018396 N 0.000
ANCCEY_11186 Ancylostoma ceylanicum ANCCEY_11186 N 0.000
ANCDUO_22746 Ancylostoma duodenale ANCDUO_22746 N 0.000
ASTEI04298 Anopheles stephensi ASTEI04298 N 0.000
BGIBMGA000762 Bombyx mori BGIBMGA000762 N 0.000
BGLB006195 Biomphalaria glabrata BGLB006195 N 0.000
Brh_R009090 Buceros rhinoceros Brh_R009090 N 0.000
Brh_R009091 Buceros rhinoceros Brh_R009091 N 0.000
CBG11788 Caenorhabditis briggsae CBG11788 N 0.000
CBG27683 Caenorhabditis briggsae CBG27683 N 0.000
CGI_10013606 Crassostrea gigas CGI_10013606 N 0.000
CGOC_0001416801 Cylicostephanus goldi CGOC_0001416801 N 0.000
CLEC007188 Cimex lectularius CLEC007188 N 0.000
Cmyd_10006636 Chelonia mydas Cmyd_10006636 N 0.000
Cmyd_10018206 Chelonia mydas Cmyd_10018206 N 0.000
D915_09728 Fasciola hepatica D915_09728 N 0.000
D918_02763 Trichuris suis D918_02763 N 0.000
DILT_0000246201 Diphyllobothrium latum DILT_0000246201 N 0.000
DILT_0001226501 Diphyllobothrium latum DILT_0001226501 I 0.000
ENSECAG00000023678 Equus caballus ENSECAG00000023678 I 0.000
ENSGMOG00000004079 Gadus morhua ENSGMOG00000004079 N 0.000
ENSLOCG00000004278 Lepisosteus oculatus ENSLOCG00000004278 N 0.000
F775_52178 Aegilops tauschii F775_52178 N 0.000
scro Drosophila melanogaster FBgn0028993 D 0.000
Gfo_R001742 Geospiza fortis Gfo_R001742 N 0.000
Gfo_R001743 Geospiza fortis Gfo_R001743 N 0.000
GPUH_0000280301 Gongylonema pulchrum GPUH_0000280301 N 0.000
Hba_18080 Heterorhabditis bacteriophora Hba_18080 N 0.000
HmN_000453400 Hymenolepis microstoma HmN_000453400 I 0.000
HmN_000683200 Hymenolepis microstoma HmN_000683200 N 0.000
HNAJ_0000742201 Hymenolepis nana HNAJ_0000742201 N 0.000
Hsal_00498--XP_394578.2_APIME Harpegnathos saltator Hsal_00498--XP_394578.2_APIME N 0.000
ISCW011755 Ixodes scapularis ISCW011755 N 0.000
L892_g18619 Steinernema scapterisci L892_g18619 N 0.000
MCOS_0000074401 Mesocestoides corti MCOS_0000074401 N 0.000
MhA1_Contig1149.frz3.gene7 Meloidogyne hapla MhA1_Contig1149.frz3.gene7 N 0.000
Myotis_brandtii_SLC6A7_10034750 Myotis brandtii Myotis_brandtii_SLC6A7_10034750 I 0.000
NECAME_06897 Necator americanus NECAME_06897 N 0.000
nRc.2.0.1.g41491 Romanomermis culicivorax nRc.2.0.1.g41491 N 0.000
Ogr00063 Ophisaurus gracilis Ogr00063 I 0.000
Ogr05812 Ophisaurus gracilis Ogr05812 N 0.000
Ppa-ceh-28 Pristionchus pacificus PPA19627 N 0.000
PXEA_0000454701 Protopolystoma xenopodis PXEA_0000454701 N 0.000
PXEA_0002847001 Protopolystoma xenopodis PXEA_0002847001 N 0.000
scaffold28-EXSNAP2012.55 Pristionchus exspectatus scaffold28-EXSNAP2012.55 N 0.000
SINV24463 Solenopsis invicta SINV24463 N 0.000
Sjc_0057900 Schistosoma japonicum Sjc_0057900 N 0.000
SNAPOd2T00004995001 Oikopleura dioica SNAPOd2T00004995001 N 0.000
SPER_0002786601 Spirometra erinaceieuropaei SPER_0002786601 N 0.000
SPER_0003017401 Spirometra erinaceieuropaei SPER_0003017401 N 0.000
SPU_019656 Strongylocentrotus purpuratus SPU_019656 N 0.000
SSLN_0001021301 Schistocephalus solidus SSLN_0001021301 I 0.000
Tal_R010537 Tyto alba Tal_R010537 N 0.000
nkx2-4 Xenopus tropicalis XB-GENE-487481 I 0.000
YQE_02582 Dendroctonus ponderosae YQE_02582 N 0.000