Ogr00836 (Ophisaurus gracilis)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 Ogr00836 T314459_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LCORL
M01304_2.00 		Homo sapiens
HYNAAWHN
NDWTTNRD		 PBM
Lambert et al.(2019)
pTH11267 		0.988 0.988
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr00836 Pipsqueak 31 69
Ogr00836 Pipsqueak 280 325

Links

Other Pipsqueak family TFs
Other Ophisaurus gracilis TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R007397 Calypte anna Aan_R007397 I 0.988
Afo_R006360 Aptenodytes forsteri Afo_R006360 I 0.976
Alligator_sinensis_CCG006744.1 Alligator sinensis Alligator_sinensis_CCG006744.1 I 0.976
Brh_R013202 Buceros rhinoceros Brh_R013202 I 0.976
LCORL Anolis carolinensis ENSACAG00000002012 I 1.000
ENSAMEG00000000192 Ailuropoda melanoleuca ENSAMEG00000000192 I 0.988
ENSAPLG00000006384 Anas platyrhynchos ENSAPLG00000006384 I 0.976
LCORL Bos taurus ENSBTAG00000046561 I 0.976
LCORL Canis familiaris ENSCAFG00000016672 I 0.976
LCORL Callithrix jacchus ENSCJAG00000012800 I 0.976
ENSCPOG00000003269 Cavia porcellus ENSCPOG00000003269 I 0.976
ENSCSAG00000016522 Chlorocebus sabaeus ENSCSAG00000016522 I 0.988
lcorl Danio rerio ENSDARG00000070098 I 0.812
LCORL Dasypus novemcinctus ENSDNOG00000001545 I 0.976
ENSDORG00000003797 Dipodomys ordii ENSDORG00000003797 I 0.988
LCORL Equus caballus ENSECAG00000000648 I 0.988
LCORL Erinaceus europaeus ENSEEUG00000000419 I 0.988
ENSFALG00000009227 Ficedula albicollis ENSFALG00000009227 I 0.976
LCORL Felis catus ENSFCAG00000029474 I 0.988
LCORL Homo sapiens ENSG00000178177 D 0.988
LCORL Gallus gallus ENSGALG00000014421 I 0.976
LCORL Gorilla gorilla ENSGGOG00000014894 I 0.976
ENSLACG00000017771 Latimeria chalumnae ENSLACG00000017771 I 0.964
LCORL Loxodonta africana ENSLAFG00000009691 I 0.964
LCORL Meleagris gallopavo ENSMGAG00000012554 I 0.976
ENSMICG00000008878 Microcebus murinus ENSMICG00000008878 I 0.988
LCORL Myotis lucifugus ENSMLUG00000013781 I 0.988
LCORL Monodelphis domestica ENSMODG00000000757 I 0.976
ENSMPUG00000002301 Mustela putorius furo ENSMPUG00000002301 I 0.976
Lcorl Mus musculus ENSMUSG00000015882 I 0.988
ENSNLEG00000016679 Nomascus leucogenys ENSNLEG00000016679 I 0.988
ENSOARG00000004333 Ovis aries ENSOARG00000004333 I 0.976
LCORL Oryctolagus cuniculus ENSOCUG00000006802 I 0.976
LCORL Otolemur garnettii ENSOGAG00000005593 I 0.976
ENSP00000371661 Macaca fascicularis ENSP00000371661 I 0.988
ENSP00000371661-D1 Bos grunniens ENSP00000371661-D1 I 0.976
ENSPANG00000024022 Papio anubis ENSPANG00000024022 I 0.976
LCORL Procavia capensis ENSPCAG00000007105 I 0.988
ENSPSIG00000017051 Pelodiscus sinensis ENSPSIG00000017051 I 0.976
LCORL Pan troglodytes ENSPTRG00000015943 I 0.976
LCORL Pteropus vampyrus ENSPVAG00000013601 I 0.988
ENSSHAG00000015746 Sarcophilus harrisii ENSSHAG00000015746 I 0.988
LCORL Sus scrofa ENSSSCG00000008748 I 0.976
ENSSTOG00000000960 Ictidomys tridecemlineatus ENSSTOG00000000960 I 0.988
LCORL Taeniopygia guttata ENSTGUG00000009625 I 0.976
ENSTSYG00000014055 Tarsius syrichta ENSTSYG00000014055 I 0.988
LCORL Tursiops truncatus ENSTTRG00000016951 I 0.988
LCORL Vicugna pacos ENSVPAG00000010356 I 0.988
Gfo_R010322 Geospiza fortis Gfo_R010322 I 0.976
Myotis_brandtii_LCORL_10024397 Myotis brandtii Myotis_brandtii_LCORL_10024397 I 0.988
Pvit_18026 Pogona vitticeps Pvit_18026 I 0.976
Tal_R001804 Tyto alba Tal_R001804 I 0.976