CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACOM029624
(
Anopheles coluzzii
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
ACOM029624
T314845_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACOM029624-PA
Pipsqueak
82
127
TEDGLQNALQDILSGRLGTRRAAMQYGIPRSTLRNKVYKMALGGKR
ACOM029624-PA
Pipsqueak
703
748
DRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPR
Links
Other
Pipsqueak
family TFs
Other
Anopheles coluzzii
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA007535
Oryza indica
BGIOSGA007535
N
0.000
BRADI3G03747
Brachypodium distachyon
BRADI3G03747
N
0.000
GRMZM2G033138
Zea mays
GRMZM2G033138
N
0.000
GSMUA_Achr8G23890_001
Musa acuminata
GSMUA_Achr8G23890_001
N
0.000
LPERR02G03280
Leersia perrieri
LPERR02G03280
N
0.000
OB02G13160
Oryza brachyantha
OB02G13160
N
0.000
ORGLA02G0034400
Oryza glaberrima
ORGLA02G0034400
N
0.000
ORUFI02G03770
Oryza rufipogon
ORUFI02G03770
N
0.000
OS02G0147800
Oryza sativa
OS02G0147800
N
0.000
Pavir.Ab00383
Panicum virgatum
Pavir.Ab00383
N
0.000
Pavir.J02165
Panicum virgatum
Pavir.J02165
N
0.000
Si019956m.g
Setaria italica
Si019956m.g
N
0.000
Traes_6AS_9762AE81D
Triticum aestivum
Traes_6AS_9762AE81D
N
0.000