ANCDUO_12248 (Ancylostoma duodenale)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF05225 (HTH_psq) IPR007889 ANCDUO_12248 T314998_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nasonia_NCBI_hmm1312624
M02436_2.00 		Nasonia vitripennis
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9266 		0.795 0.795
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ANCDUO_12248 Pipsqueak 15 59

Links

Other Pipsqueak family TFs
Other Ancylostoma duodenale TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28308.m000066 Ricinus communis 28308.m000066 N
Bostr.23794s0250 Boechera stricta Bostr.23794s0250 N
cassava3830.m1 Manihot esculenta cassava3830.m1 N
Ca_17704 Cicer arietinum Ca_17704 N
Eucgr.A00520 Eucalyptus grandis Eucgr.A00520 N
GLYMA01G29760 Glycine max GLYMA01G29760 N
GLYMA03G07590 Glycine max GLYMA03G07590 N
GLYMA07G18320 Glycine max GLYMA07G18320 N
GLYMA18G43190 Glycine max GLYMA18G43190 N
LjSGA_009825.1 Lotus japonicus LjSGA_009825.1 N
mgf020472m Mimulus guttatus mgf020472m N