CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0000352701
(
Syphacia muris
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
SMUV_0000352701
T315130_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000352701-mRNA-1
Pipsqueak
16
61
SQASLDAAVKDIRSGLLGTRRASVVYGIPRSTLRNKIYKLDAAESQ
SMUV_0000352701-mRNA-1
Pipsqueak
116
158
KKTLEEAVKSVRRGEMSVHRAGSYYGVPHSTLEYKVKERNLSK
Links
Other
Pipsqueak
family TFs
Other
Syphacia muris
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O3_09824
Capronia epimyces
A1O3_09824
N
OIDMADRAFT_166862
Oidiodendron maius
OIDMADRAFT_166862
N
PV04_06317
Capronia semiimmersa
PV04_06317
N
PV05_07968
Exophiala xenobiotica
PV05_07968
N
PV06_09766
Exophiala oligosperma
PV06_09766
N
PV07_03616
Cladophialophora immunda
PV07_03616
N
PV09_00174
Verruconis gallopava
PV09_00174
N
PV10_07985
Exophiala mesophila
PV10_07985
N
Z517_01070
Fonsecaea pedrosoi
Z517_01070
N