CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Prox1
(
Dipodomys ordii
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05044 (HPD)
IPR007738
ENSDORG00000007622
T316454_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PROX1
M03445_2.00
Homo sapiens
BAAGRCGTCTTV
BAAGACGYCTTV
SELEX
Jolma et al.(2013)
PROX1_1
0.917
0.917
PROX1
M05691_2.00
Homo sapiens
BAMGRCGTCDTV
BAHGACGYCKTV
SELEX
Yin et al.(2017)
PROX1_eDBD_HT-SELEX
0.917
0.917
PROX1
M05692_2.00
Homo sapiens
BAAGRYGTCTTV
BAAGACRYCTTV
SELEX
Yin et al.(2017)
PROX1_eDBD_Methyl-HT-SELEX
0.917
0.917
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000007146
Prospero
579
687
GLSPNHLKKAKLMFFYTRYPSSNMLKTYFSDVKFNRCITSQLIKWFSNFREFYYIQMEKYARQAINDGVTSTEELSITRDCELYRALNMHYNKANDFEVFQRDSWKLRR
Links
Other
Prospero
family TFs
Other
Dipodomys ordii
TFs
93 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CFIO01_08122
Colletotrichum fioriniae
CFIO01_08122
I
CGGC5_8345
Colletotrichum gloeosporioides
CGGC5_8345
I
CH063_06422
Colletotrichum higginsianum
CH063_06422
I
Cob_01744
Colletotrichum orbiculare
Cob_01744
I
GLRG_03859
Colletotrichum graminicola
GLRG_03859
I
MAM_03637
Metarhizium album
MAM_03637
I