CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ACYPI005133
(
Acyrthosiphon pisum
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ACYPI005133
T316969_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dl
M02712_2.00
Drosophila melanogaster
SGGGKTTTTYCV
BGRAAAAMCCCS
SELEX
Mathelier et al.(2014)
MA0022.1
0.751
0.751
dl
M02713_2.00
Drosophila melanogaster
GGGGWWTTCC
GGAAWWCCCC
SELEX
Mathelier et al.(2014)
MA0023.1
0.751
0.751
dl
M09691_2.00
Drosophila melanogaster
BRGRWTTYCCM
KGGRAAWYCYV
Misc
Kulakovskiy et al.(2009)
dl
0.751
0.751
dl
M11243_2.00
Drosophila melanogaster
GGGTTTTTCCV
BGGAAAAACCC
Transfac
Matys et al.(2006)
I$DL_01
0.751
0.751
dl
M11244_2.00
Drosophila melanogaster
BRDTTTTCYSD
HSRGAAAAHYV
Transfac
Matys et al.(2006)
I$DL_02
0.751
0.751
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACYPI005133-PA
Rel
18
187
IKIVEQPASKALRFRYECEGRSAGSIPGVNSSTENKTYPTIQIVGYKGRAVVVVSCVTKDRPYRPHPHNLVGRDNCKKGICTIEINNESMAASFQNLGIQCVKRKDIDEALRVREEIRVDPFRTGFSHKENPTSIDLNAVRLCFQAFLGGTQKGKYSILEPIVSDPIYDK
Links
Other
Rel
family TFs
Other
Acyrthosiphon pisum
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cmyd_10002847
Chelonia mydas
Cmyd_10002847
N
ENSAMEG00000001827
Ailuropoda melanoleuca
ENSAMEG00000001827
N
TCF23
Bos taurus
ENSBTAG00000014813
N
TCF23
Canis familiaris
ENSCAFG00000030192
N
TCF23
Choloepus hoffmanni
ENSCHOG00000004803
N
TCF23
Callithrix jacchus
ENSCJAG00000001198
N
ENSCPOG00000003785
Cavia porcellus
ENSCPOG00000003785
N
ENSCSAG00000009631
Chlorocebus sabaeus
ENSCSAG00000009631
N
ENSDNOG00000030981
Dasypus novemcinctus
ENSDNOG00000030981
N
Tcf23
Dipodomys ordii
ENSDORG00000014403
N
TCF23
Equus caballus
ENSECAG00000021374
N
TCF23
Erinaceus europaeus
ENSEEUG00000007250
N
TCF23
Felis catus
ENSFCAG00000022795
N
TCF23
Homo sapiens
ENSG00000163792
N
TCF23
Gorilla gorilla
ENSGGOG00000002612
N
TCF23
Loxodonta africana
ENSLAFG00000014587
N
ENSLOCG00000015901
Lepisosteus oculatus
ENSLOCG00000015901
N
ENSMEUG00000010665
Macropus eugenii
ENSMEUG00000010665
N
TCF23
Microcebus murinus
ENSMICG00000017064
N
TCF23
Macaca mulatta
ENSMMUG00000015867
N
TCF23
Monodelphis domestica
ENSMODG00000015714
N
Tcf23
Mus musculus
ENSMUSG00000006642
N
ENSNLEG00000003009
Nomascus leucogenys
ENSNLEG00000003009
N
TCF23
Ornithorhynchus anatinus
ENSOANG00000003936
N
ENSOARG00000019168
Ovis aries
ENSOARG00000019168
N
ENSOCUG00000008655
Oryctolagus cuniculus
ENSOCUG00000008655
N
ENSOPRG00000010556
Ochotona princeps
ENSOPRG00000010556
N
ENSP00000296096
Macaca fascicularis
ENSP00000296096
N
ENSP00000296096-D1
Bos grunniens
ENSP00000296096-D1
N
ENSPANG00000009856
Papio anubis
ENSPANG00000009856
N
ENSPPYG00000012560
Pongo abelii
ENSPPYG00000012560
N
TCF23
Pan troglodytes
ENSPTRG00000011753
N
ENSPVAG00000015152
Pteropus vampyrus
ENSPVAG00000015152
N
Tcf23
Rattus norvegicus
ENSRNOG00000025736
N
ENSSHAG00000012462
Sarcophilus harrisii
ENSSHAG00000012462
N
TCF23
Sus scrofa
ENSSSCG00000027409
N
ENSSTOG00000015523
Ictidomys tridecemlineatus
ENSSTOG00000015523
N
TCF23
Tupaia belangeri
ENSTBEG00000006967
N
TCF23
Tursiops truncatus
ENSTTRG00000005255
N
Myotis_brandtii_TCF23_10031193
Myotis brandtii
Myotis_brandtii_TCF23_10031193
N