CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nfkb2
(
Gasterosteus aculeatus
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSGACG00000001323
T317176_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000001727
Rel
1
174
SQRGFRFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYVGHARVEVQLVSHTDPPSVHAHSLVGRHCTENGTCTLDIGPNDLAASFSNLGILHVTKKGVVEVLSRRLRDERKRLKGPHCHLTEENGLLKEAKELGKVMDLNIVRLKFTAYLQDSNGGFTRGLKPVVSNPIYDS
ENSGACP00000001732
Rel
12
207
IQIIEEPKQRGFRFRYECEGPSHGGLPGASSEKNRRTYPTVKINNYVGHARVEVQLVSHTDPPSVHAHSLVGRHCTENGTCTLDIGPNDLAASFSNLGILHVTKKGVVEVLSRRLRDERKRLKGPHCHLTGTHTSQASHNTLPHSEENGLLKEAKELGKVMDLNIVRLKFTAYLQDSNGGFTRGLKPVVSNPIYDS
Links
Other
Rel
family TFs
Other
Gasterosteus aculeatus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgeneshPB_pg.C_110133
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_110133
N
estExt_fgeneshPB_pg.C_30269
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_30269
N
fgeneshMC_pg.4_#_438
Mucor circinelloides
fgeneshMC_pg.4_#_438
N
fgeneshPB_pg.30__104
Phycomyces blakesleeanus
fgeneshPB_pg.30__104
N
GLOINDRAFT_319860
Rhizophagus irregularis
GLOINDRAFT_319860
N
RO3G_07798
Rhizopus oryzae
RO3G_07798
N
RO3G_07916
Rhizopus oryzae
RO3G_07916
N