CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTNIG00000017107
(
Tetraodon nigroviridis
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ENSTNIG00000017107
T317548_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000020242
Rel
3
183
IQIFEQPKQRRMRFRYKCEGRSAGSIPGENSSDNNRTYPSLQILNYCGKGKVRVYLVTKNEPYRPHPHDLVGKDCKDGFYEAEFGPDRRVIAFQNLGIQCVRRREVKDAILQRINRGINPFSVPAFLDDNYYNTLMVGAAEITEEYDLNVVRLCIQVFLQDETGQYTRPLRPIVTNPIYDN
Links
Other
Rel
family TFs
Other
Tetraodon nigroviridis
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgeneshPB_pg.C_10936
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_10936
N
estExt_fgeneshPB_pg.C_110133
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_110133
N
estExt_fgeneshPB_pg.C_30269
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_30269
N
fgeneshMC_pg.10_#_227
Mucor circinelloides
fgeneshMC_pg.10_#_227
N
fgeneshMC_pg.4_#_438
Mucor circinelloides
fgeneshMC_pg.4_#_438
N
fgeneshPB_pg.30__104
Phycomyces blakesleeanus
fgeneshPB_pg.30__104
N
GLOINDRAFT_319860
Rhizophagus irregularis
GLOINDRAFT_319860
N
PFL1_03417
Pseudozyma flocculosa
PFL1_03417
N
RO3G_04517
Rhizopus oryzae
RO3G_04517
N
RO3G_07916
Rhizopus oryzae
RO3G_07916
N
UM00750
Ustilago maydis
UM00750
N