CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GJ16233
(
Drosophila virilis
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
FBgn0203418
T317639_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Dif
M03953_2.00
Drosophila melanogaster
BGGGWTTTYCCCN
NGGGRAAAWCCCV
SELEX
Nitta et al.(2015)
Dif_1
0.749
0.749
Dif
M03954_2.00
Drosophila melanogaster
NGGGDWTTHCCCN
NGGGDAAWHCCCN
SELEX
Nitta et al.(2015)
Dif_2
0.749
0.749
Dif
M03955_2.00
Drosophila melanogaster
BGGGAWWTCCCV
BGGGAWWTCCCV
SELEX
Nitta et al.(2015)
Dif_3
0.749
0.749
Dif
M03956_2.00
Drosophila melanogaster
GGRAAWNNNNNNNWTTYCC
GGRAAWNNNNNNNWTTYCC
SELEX
Nitta et al.(2015)
Dif_4
0.749
0.749
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0230650
Rel
34
204
IRIVEEPTNKIIRFRYKCEGRTAGSIAGMNSTPEAKTFPTIEIVDYSGPVVVVVSCVTRDKPYRQHPHWLVSKEEVDNCKSGVYSKRLPPEERRLELQKVGIQCVKKTDVRESLLAREQKNIDPYHAKFDHKDNISSINLYELRLCYQAFIKVGNNNVPLDPVVSSPIYGK
Links
Other
Rel
family TFs
Other
Drosophila virilis
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACUA006006
Anopheles culicifacies
ACUA006006
N
AFUN002156
Anopheles funestus
AFUN002156
N
AMIN005434
Anopheles minimus
AMIN005434
N