Brh_R004055 (Buceros rhinoceros)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Brh_R004055 T317743_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nfatc1
M09360_2.00 		Mus musculus
KABTCANWBTTTCCW
WGGAAAVWNTGAVTM		 Misc
Kulakovskiy et al.(2013)
NFAC1_MOUSE.H11MO.0.A 		0.991 0.991
NFATC1
M02443_2.00 		Meleagris gallopavo
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8315 		0.982 0.982
nfatc1
M02446_2.00 		Xenopus tropicalis
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8557 		0.982 0.982
NFATC1
M02444_2.00 		Monodelphis domestica
NNDTTCCDNN
NNHGGAAHNN		 PBM
Weirauch et al.(2014)
pTH8401 		0.954 0.954
NFATC1
M03449_2.00 		Homo sapiens
HKGRAAADDNWBTTTCCAYN
NRTGGAAAVWNHHTTTYCMD		 SELEX
Jolma et al.(2013)
NFATC1_1 		0.890 0.890
NFATC1
M03450_2.00 		Homo sapiens
TTTCCAYWRYGGAAA
TTTCCRYWRTGGAAA		 SELEX
Jolma et al.(2013)
NFATC1_2 		0.890 0.890
NFATC1
M03451_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Jolma et al.(2013)
NFATC1_3 		0.890 0.890
NFATC1
M02747_2.00 		Homo sapiens
DTTCCRYGGAA
TTCCRYGGAAH		 SELEX
Jolma et al.(2010)
NFATc1_dimer 		0.890 0.890
NFATC1
M02748_2.00 		Homo sapiens
GGAANDTTCC
GGAAHNTTCC		 SELEX
Jolma et al.(2010)
NFATc1_dimer_type2 		0.890 0.890
NFATC1
M02749_2.00 		Homo sapiens
WDTTTCCAY
RTGGAAAHW		 SELEX
Jolma et al.(2010)
NFATc1_monomer 		0.890 0.890
NFATC1
M05711_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_1 		0.890 0.890
NFATC1
M05712_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_2 		0.890 0.890
NFATC1
M09349_2.00 		Homo sapiens
HBYHWBWBTTTCCWB
VWGGAAAVWVWDRVD		 Misc
Kulakovskiy et al.(2013)
NFAC1_HUMAN.H11MO.0.B 		0.890 0.890
NFATC1
M09625_2.00 		Homo sapiens
WBTTTCCAYY
RRTGGAAAVW		 Misc
Heinz et al.(2010)
Jurkat-NFATC1_Jolma_et_al. 		0.890 0.890
NFATC1
M11232_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q4 		0.890 0.890
NFATC1
M11233_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5_01 		0.890 0.890
NFATC1
M11234_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5 		0.890 0.890
NFATC1
M05713_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_1 		0.890 0.890
NFATC1
M05714_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_2 		0.890 0.890
NFATC2
M02441_2.00 		Homo sapiens
WNTTTCCRHN
NDYGGAAANW		 PBM
Weirauch et al.(2014)
pTH9196 		0.853 0.853
NFATC2
M05705_2.00 		Homo sapiens
DTTTCCATGGAAAM
KTTTCCATGGAAAH		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_1 		0.853 0.853
NFATC2
M05706_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_2 		0.853 0.853
NFATC2
M09346_2.00 		Homo sapiens
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_HUMAN.H11MO.0.B 		0.853 0.853
NFATC2
M11221_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q4 		0.853 0.853
NFATC2
M11222_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q5 		0.853 0.853
NFATC2
M11223_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q6 		0.853 0.853
NFATC2
M08462_2.00 		Homo sapiens
TTTTCCA
TGGAAAA		 COMPILED
Mathelier et al.(2014)
MA0152.1 		0.853 0.853
NFATC2
M05707_2.00 		Homo sapiens
NTTTCCGCGGAAAN
NTTTCCGCGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_1 		0.853 0.853
NFATC2
M05708_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_2 		0.853 0.853
NFATC3
M02440_2.00 		Homo sapiens
DNTTTCCRNN
NNYGGAAANH		 PBM
Weirauch et al.(2014)
pTH9192 		0.844 0.844
NFATC3
M05693_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1 		0.844 0.844
NFATC3
M05694_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2 		0.844 0.844
NFATC3
M05695_2.00 		Homo sapiens
DYGGAAANNNNNNNTTTCCRH
DYGGAAANNNNNNNTTTCCRH		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3 		0.844 0.844
NFATC3
M09343_2.00 		Homo sapiens
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B 		0.844 0.844
Nfatc2
M09357_2.00 		Mus musculus
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_MOUSE.H11MO.0.C 		0.844 0.844
Nfatc3
M09359_2.00 		Mus musculus
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B 		0.844 0.844
NFATC3
M11217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q3 		0.844 0.844
NFATC3
M11218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q5 		0.844 0.844
NFATC3
M05696_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1 		0.844 0.844
NFATC3
M05697_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2 		0.844 0.844
NFATC3
M05698_2.00 		Homo sapiens
RYGGAAANHNNNDNTTTCCRY
RYGGAAANHNNNDNTTTCCRY		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3 		0.844 0.844
NFATC4
M01306_2.00 		Homo sapiens
NNNWWWVYRN
NYRBWWWNNN		 PBM
Lambert et al.(2019)
pTH9347 		0.798 0.798
NFATC4
M05701_2.00 		Homo sapiens
DBTTTCCRYN
NRYGGAAAVH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_1 		0.798 0.798
NFATC4
M05702_2.00 		Homo sapiens
NKTTCCATGGAAMV
BKTTCCATGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_2 		0.798 0.798
NFATC4
M09345_2.00 		Homo sapiens
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_HUMAN.H11MO.0.C 		0.798 0.798
Nfatc4
M09354_2.00 		Mus musculus
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_MOUSE.H11MO.0.C 		0.798 0.798
NFATC4
M11219_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3_01 		0.798 0.798
NFATC4
M11220_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3 		0.798 0.798
NFATC4
M05703_2.00 		Homo sapiens
DNTTTCCRYN
NRYGGAAANH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_1 		0.798 0.798
NFATC4
M05704_2.00 		Homo sapiens
NKTTCCRYGGAAMN
NKTTCCRYGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_2 		0.798 0.798
ENSTNIG00000018271
M02445_2.00 		Tetraodon nigroviridis
DNDTTCCRNN
NNYGGAAHNH		 PBM
Weirauch et al.(2014)
pTH9005 		0.780 0.780
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Brh_R004055 Rel 1 127

Links

Other Rel family TFs
Other Buceros rhinoceros TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R003860 Calypte anna Aan_R003860 I 0.844
Aan_R015322 Calypte anna Aan_R015322 I 0.991
Aan_R015820 Calypte anna Aan_R015820 I 0.853
Afo_R003256 Aptenodytes forsteri Afo_R003256 I 0.853
Afo_R009327 Aptenodytes forsteri Afo_R009327 I 0.991
Alligator_sinensis_CCG001714.1 Alligator sinensis Alligator_sinensis_CCG001714.1 I 0.853
Alligator_sinensis_CCG007637.1 Alligator sinensis Alligator_sinensis_CCG007637.1 I 0.899
Cmyd_10002066 Chelonia mydas Cmyd_10002066 I 0.807
Cmyd_10017459 Chelonia mydas Cmyd_10017459 I 0.853
Cmyd_10021444 Chelonia mydas Cmyd_10021444 I 0.972
NFATC1 Anolis carolinensis ENSACAG00000000941 I 0.963
NFATC2 Anolis carolinensis ENSACAG00000013075 I 0.844
ENSAMEG00000010314 Ailuropoda melanoleuca ENSAMEG00000010314 I 0.720
ENSAMEG00000015941 Ailuropoda melanoleuca ENSAMEG00000015941 I 0.798
ENSAMXG00000005881 Astyanax mexicanus ENSAMXG00000005881 I 0.844
ENSAMXG00000011048 Astyanax mexicanus ENSAMXG00000011048 I 0.908
ENSAMXG00000018016 Astyanax mexicanus ENSAMXG00000018016 I 0.713
ENSAPLG00000007259 Anas platyrhynchos ENSAPLG00000007259 I 0.853
ENSAPLG00000013017 Anas platyrhynchos ENSAPLG00000013017 I 0.991
NFATC1 Bos taurus ENSBTAG00000000656 I 0.945
NFATC4 Bos taurus ENSBTAG00000006366 I 0.798
NFATC2 Bos taurus ENSBTAG00000018270 I 0.862
ENSBTAP00000024318-D1 Bos grunniens ENSBTAP00000024318-D1 I 0.862
NFATC1 Canis familiaris ENSCAFG00000000011 I 0.720
NFATC4 Canis familiaris ENSCAFG00000012375 I 0.798
NFATC4 Callithrix jacchus ENSCJAG00000006414 I 0.798
NFATC3 Callithrix jacchus ENSCJAG00000015726 I 0.876
NFATC1 Callithrix jacchus ENSCJAG00000023446 I 0.899
NFATC1 Cavia porcellus ENSCPOG00000003999 I 0.945
nfatc1 Danio rerio ENSDARG00000036168 I 0.917
nfatc3b Danio rerio ENSDARG00000051729 I 0.817
nfatc3a Danio rerio ENSDARG00000076297 I 0.826
nfatc2b Danio rerio ENSDARG00000079972 I 0.780
NFATC3 Dasypus novemcinctus ENSDNOG00000018583 I 0.853
NFATC1 Dasypus novemcinctus ENSDNOG00000025306 I 0.807
NFATC4 Equus caballus ENSECAG00000010992 I 0.798
NFATC1 Equus caballus ENSECAG00000019813 I 0.991
NFATC4 Erinaceus europaeus ENSEEUG00000012781 I 0.789
ENSFALG00000007757 Ficedula albicollis ENSFALG00000007757 I 0.844
ENSFALG00000013042 Ficedula albicollis ENSFALG00000013042 I 0.835
ENSFALG00000013333 Ficedula albicollis ENSFALG00000013333 I 1.000
NFATC1 Felis catus ENSFCAG00000000884 I 0.720
NFATC4 Felis catus ENSFCAG00000005602 I 0.798
NFATC3 Felis catus ENSFCAG00000030997 I 0.853
NFATC4 Homo sapiens ENSG00000100968 D 0.725
NFATC1 Homo sapiens ENSG00000131196 D 0.900
NFATC1 Gasterosteus aculeatus ENSGACG00000005481 I 0.945
ENSGACG00000008153 Gasterosteus aculeatus ENSGACG00000008153 I 0.724
NFATC3 Gallus gallus ENSGALG00000003396 I 0.844
NFATC2 Gallus gallus ENSGALG00000007963 I 0.844
ENSGALG00000012654 Gallus gallus ENSGALG00000012654 I 0.982
ENSGMOG00000003746 Gadus morhua ENSGMOG00000003746 I 0.844
ENSGMOG00000006631 Gadus morhua ENSGMOG00000006631 I 0.908
ENSGMOG00000017004 Gadus morhua ENSGMOG00000017004 I 0.835
ENSLACG00000000557 Latimeria chalumnae ENSLACG00000000557 I 0.920
ENSLACG00000001332 Latimeria chalumnae ENSLACG00000001332 I 0.844
ENSLACG00000008030 Latimeria chalumnae ENSLACG00000008030 I 0.771
NFATC1 Loxodonta africana ENSLAFG00000008297 I 0.936
NFATC4 Loxodonta africana ENSLAFG00000014579 I 0.798
NFATC3 Loxodonta africana ENSLAFG00000014599 I 0.835
ENSLOCG00000002372 Lepisosteus oculatus ENSLOCG00000002372 I 0.844
ENSLOCG00000007875 Lepisosteus oculatus ENSLOCG00000007875 I 0.720
ENSMEUG00000011495 Macropus eugenii ENSMEUG00000011495 I 0.727
NFATC1 Meleagris gallopavo ENSMGAG00000002215 D 0.982
NFATC3 Meleagris gallopavo ENSMGAG00000003992 I 0.844
NFATC2 Meleagris gallopavo ENSMGAG00000009346 I 0.844
NFATC1 Myotis lucifugus ENSMLUG00000001296 I 0.720
NFATC4 Myotis lucifugus ENSMLUG00000011274 I 0.798
NFATC2 Myotis lucifugus ENSMLUG00000014668 I 0.862
NFATC3 Macaca mulatta ENSMMUG00000021843 I 0.862
NFATC4 Monodelphis domestica ENSMODG00000002992 I 0.807
NFATC1 Monodelphis domestica ENSMODG00000012018 D 0.727
NFATC2 Monodelphis domestica ENSMODG00000016363 I 0.844
ENSMPUG00000005665 Mustela putorius furo ENSMPUG00000005665 I 0.798
ENSMPUG00000006942 Mustela putorius furo ENSMPUG00000006942 I 0.853
ENSMPUG00000016650 Mustela putorius furo ENSMPUG00000016650 I 0.936
Nfatc3 Mus musculus ENSMUSG00000031902 D 0.844
Nfatc1 Mus musculus ENSMUSG00000033016 D 0.991
ENSNLEG00000005116 Nomascus leucogenys ENSNLEG00000005116 I 0.826
NFATC2 Ornithorhynchus anatinus ENSOANG00000008671 I 0.844
ENSOANG00000021344 Ornithorhynchus anatinus ENSOANG00000021344 I 0.771
ENSOARG00000004215 Ovis aries ENSOARG00000004215 I 0.936
ENSOARG00000014239 Ovis aries ENSOARG00000014239 I 0.862
ENSOARG00000019084 Ovis aries ENSOARG00000019084 I 0.798
NFATC1 Oryctolagus cuniculus ENSOCUG00000006480 I 0.737
NFATC2 Oryctolagus cuniculus ENSOCUG00000012556 I 0.862
NFATC1 Otolemur garnettii ENSOGAG00000008159 I 0.720
NFATC2 Otolemur garnettii ENSOGAG00000013787 I 0.862
ENSONIG00000006889 Oreochromis niloticus ENSONIG00000006889 I 0.771
ENSONIG00000007307 Oreochromis niloticus ENSONIG00000007307 I 0.927
ENSONIG00000010613 Oreochromis niloticus ENSONIG00000010613 I 0.734
ENSONIG00000013792 Oreochromis niloticus ENSONIG00000013792 I 0.917
ENSONIG00000016552 Oreochromis niloticus ENSONIG00000016552 I 0.844
NFATC1 Ochotona princeps ENSOPRG00000008019 I 0.713
nfatc1 Oryzias latipes ENSORLG00000008055 I 0.881
ENSP00000388910-D1 Bos grunniens ENSP00000388910-D1 I 0.798
ENSPCAG00000002972 Procavia capensis ENSPCAG00000002972 I 0.725
NFATC3 Procavia capensis ENSPCAG00000005143 I 0.853
ENSPFOG00000000831 Poecilia formosa ENSPFOG00000000831 I 0.798
ENSPFOG00000012167 Poecilia formosa ENSPFOG00000012167 I 0.752
ENSPFOG00000019133 Poecilia formosa ENSPFOG00000019133 I 0.713
ENSPFOG00000021891 Poecilia formosa ENSPFOG00000021891 I 0.798
ENSPPYG00000007483 Pongo abelii ENSPPYG00000007483 I 0.844
ENSPSIG00000011711 Pelodiscus sinensis ENSPSIG00000011711 I 0.748
ENSPSIG00000013745 Pelodiscus sinensis ENSPSIG00000013745 I 0.853
Nfatc1 Rattus norvegicus ENSRNOG00000017146 I 0.945
Nfatc4 Rattus norvegicus ENSRNOG00000020482 I 0.798
Nfatc3 Rattus norvegicus ENSRNOG00000054264 I 0.844
ENSSHAG00000006860 Sarcophilus harrisii ENSSHAG00000006860 I 0.807
ENSSHAG00000009139 Sarcophilus harrisii ENSSHAG00000009139 I 0.727
ENSSHAG00000010150 Sarcophilus harrisii ENSSHAG00000010150 I 0.835
ENSSHAG00000018222 Sarcophilus harrisii ENSSHAG00000018222 I 0.844
NFATC4 Sus scrofa ENSSSCG00000001986 I 0.798
ENSSTOG00000008168 Ictidomys tridecemlineatus ENSSTOG00000008168 I 0.713
ENSSTOG00000013460 Ictidomys tridecemlineatus ENSSTOG00000013460 I 0.862
NFATC1 Taeniopygia guttata ENSTGUG00000006621 I 0.755
NFATC3 Taeniopygia guttata ENSTGUG00000007006 I 0.844
ENSTNIG00000003611 Tetraodon nigroviridis ENSTNIG00000003611 I 0.743
ENSTNIG00000012105 Tetraodon nigroviridis ENSTNIG00000012105 I 0.819
ENSTNIG00000018271 Tetraodon nigroviridis ENSTNIG00000018271 D 0.780
ENSTNIG00000018395 Tetraodon nigroviridis ENSTNIG00000018395 I 0.817
NFATC2 Takifugu rubripes ENSTRUG00000006498 I 0.771
nfatc3a Takifugu rubripes ENSTRUG00000007833 I 0.844
ENSTRUG00000010864 Takifugu rubripes ENSTRUG00000010864 I 0.743
NFATC1 Tursiops truncatus ENSTTRG00000016530 I 0.936
ENSXMAG00000000761 Xiphophorus maculatus ENSXMAG00000000761 I 0.899
ENSXMAG00000003976 Xiphophorus maculatus ENSXMAG00000003976 I 0.798
ENSXMAG00000009087 Xiphophorus maculatus ENSXMAG00000009087 I 0.936
Gfo_R000615 Geospiza fortis Gfo_R000615 I 1.000
Gfo_R009589 Geospiza fortis Gfo_R009589 I 0.844
Gfo_R015940 Geospiza fortis Gfo_R015940 I 0.844
Myotis_brandtii_NFATC1_10034214 Myotis brandtii Myotis_brandtii_NFATC1_10034214 I 0.720
Myotis_brandtii_NFATC2_10026354 Myotis brandtii Myotis_brandtii_NFATC2_10026354 I 0.862
Myotis_brandtii_Nfatc4_10003693 Myotis brandtii Myotis_brandtii_Nfatc4_10003693 I 0.798
Ogr08131 Ophisaurus gracilis Ogr08131 I 0.835
Pvit_03343 Pogona vitticeps Pvit_03343 I 0.844
Pvit_05133 Pogona vitticeps Pvit_05133 I 0.991
Pvit_07799 Pogona vitticeps Pvit_07799 I 0.853
Tal_R008185 Tyto alba Tal_R008185 I 0.853
nfatc3.S Xenopus laevis XB-GENE-866300 I 0.807
nfatc1 Xenopus tropicalis XB-GENE-876756 D 0.982
nfatc1.L Xenopus laevis XB-GENE-876764 I 0.741