Cmyd_10021444 (Chelonia mydas)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 Cmyd_10021444 T317761_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Nfatc1
M09360_2.00 		Mus musculus
KABTCANWBTTTCCW
WGGAAAVWNTGAVTM		 Misc
Kulakovskiy et al.(2013)
NFAC1_MOUSE.H11MO.0.A 		0.972 0.972
NFATC1
M02443_2.00 		Meleagris gallopavo
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8315 		0.958 0.958
nfatc1
M02446_2.00 		Xenopus tropicalis
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8557 		0.944 0.944
NFATC1
M02444_2.00 		Monodelphis domestica
NNDTTCCDNN
NNHGGAAHNN		 PBM
Weirauch et al.(2014)
pTH8401 		0.937 0.937
NFATC1
M03449_2.00 		Homo sapiens
HKGRAAADDNWBTTTCCAYN
NRTGGAAAVWNHHTTTYCMD		 SELEX
Jolma et al.(2013)
NFATC1_1 		0.902 0.902
NFATC1
M03450_2.00 		Homo sapiens
TTTCCAYWRYGGAAA
TTTCCRYWRTGGAAA		 SELEX
Jolma et al.(2013)
NFATC1_2 		0.902 0.902
NFATC1
M03451_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Jolma et al.(2013)
NFATC1_3 		0.902 0.902
NFATC1
M02747_2.00 		Homo sapiens
DTTCCRYGGAA
TTCCRYGGAAH		 SELEX
Jolma et al.(2010)
NFATc1_dimer 		0.902 0.902
NFATC1
M02748_2.00 		Homo sapiens
GGAANDTTCC
GGAAHNTTCC		 SELEX
Jolma et al.(2010)
NFATc1_dimer_type2 		0.902 0.902
NFATC1
M02749_2.00 		Homo sapiens
WDTTTCCAY
RTGGAAAHW		 SELEX
Jolma et al.(2010)
NFATc1_monomer 		0.902 0.902
NFATC1
M05711_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_1 		0.902 0.902
NFATC1
M05712_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_2 		0.902 0.902
NFATC1
M09349_2.00 		Homo sapiens
HBYHWBWBTTTCCWB
VWGGAAAVWVWDRVD		 Misc
Kulakovskiy et al.(2013)
NFAC1_HUMAN.H11MO.0.B 		0.902 0.902
NFATC1
M09625_2.00 		Homo sapiens
WBTTTCCAYY
RRTGGAAAVW		 Misc
Heinz et al.(2010)
Jurkat-NFATC1_Jolma_et_al. 		0.902 0.902
NFATC1
M11232_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q4 		0.902 0.902
NFATC1
M11233_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5_01 		0.902 0.902
NFATC1
M11234_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5 		0.902 0.902
NFATC1
M05713_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_1 		0.902 0.902
NFATC1
M05714_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_2 		0.902 0.902
NFATC3
M02440_2.00 		Homo sapiens
DNTTTCCRNN
NNYGGAAANH		 PBM
Weirauch et al.(2014)
pTH9192 		0.853 0.853
NFATC2
M02441_2.00 		Homo sapiens
WNTTTCCRHN
NDYGGAAANW		 PBM
Weirauch et al.(2014)
pTH9196 		0.853 0.853
NFATC2
M05705_2.00 		Homo sapiens
DTTTCCATGGAAAM
KTTTCCATGGAAAH		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_1 		0.853 0.853
NFATC2
M05706_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_2 		0.853 0.853
NFATC3
M05693_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1 		0.853 0.853
NFATC3
M05694_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2 		0.853 0.853
NFATC3
M05695_2.00 		Homo sapiens
DYGGAAANNNNNNNTTTCCRH
DYGGAAANNNNNNNTTTCCRH		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3 		0.853 0.853
NFATC2
M09346_2.00 		Homo sapiens
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_HUMAN.H11MO.0.B 		0.853 0.853
NFATC3
M09343_2.00 		Homo sapiens
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B 		0.853 0.853
Nfatc2
M09357_2.00 		Mus musculus
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_MOUSE.H11MO.0.C 		0.853 0.853
Nfatc3
M09359_2.00 		Mus musculus
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B 		0.853 0.853
NFATC2
M11221_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q4 		0.853 0.853
NFATC2
M11222_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q5 		0.853 0.853
NFATC2
M11223_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q6 		0.853 0.853
NFATC3
M11217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q3 		0.853 0.853
NFATC3
M11218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q5 		0.853 0.853
NFATC2
M08462_2.00 		Homo sapiens
TTTTCCA
TGGAAAA		 COMPILED
Mathelier et al.(2014)
MA0152.1 		0.853 0.853
NFATC2
M05707_2.00 		Homo sapiens
NTTTCCGCGGAAAN
NTTTCCGCGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_1 		0.853 0.853
NFATC2
M05708_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_2 		0.853 0.853
NFATC3
M05696_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1 		0.853 0.853
NFATC3
M05697_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2 		0.853 0.853
NFATC3
M05698_2.00 		Homo sapiens
RYGGAAANHNNNDNTTTCCRY
RYGGAAANHNNNDNTTTCCRY		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3 		0.853 0.853
NFATC4
M01306_2.00 		Homo sapiens
NNNWWWVYRN
NYRBWWWNNN		 PBM
Lambert et al.(2019)
pTH9347 		0.804 0.804
NFATC4
M05701_2.00 		Homo sapiens
DBTTTCCRYN
NRYGGAAAVH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_1 		0.804 0.804
NFATC4
M05702_2.00 		Homo sapiens
NKTTCCATGGAAMV
BKTTCCATGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_2 		0.804 0.804
NFATC4
M09345_2.00 		Homo sapiens
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_HUMAN.H11MO.0.C 		0.804 0.804
Nfatc4
M09354_2.00 		Mus musculus
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_MOUSE.H11MO.0.C 		0.804 0.804
NFATC4
M11219_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3_01 		0.804 0.804
NFATC4
M11220_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3 		0.804 0.804
NFATC4
M05703_2.00 		Homo sapiens
DNTTTCCRYN
NRYGGAAANH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_1 		0.804 0.804
NFATC4
M05704_2.00 		Homo sapiens
NKTTCCRYGGAAMN
NKTTCCRYGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_2 		0.804 0.804
ENSTNIG00000018271
M02445_2.00 		Tetraodon nigroviridis
DNDTTCCRNN
NNYGGAAHNH		 PBM
Weirauch et al.(2014)
pTH9005 		0.776 0.776
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10021444 Rel 388 548

Links

Other Rel family TFs
Other Chelonia mydas TFs

253 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_078350 Acremonium chrysogenum ACRE_078350 N 0.000
BBA_03307 Beauveria bassiana BBA_03307 N 0.000
AFUA_5G01550 Aspergillus fumigatus CADAFUAG00002870 N 0.000
CADANGAG00005441 Aspergillus niger CADANGAG00005441 N 0.000
CFIO01_02089 Colletotrichum fioriniae CFIO01_02089 N 0.000
CFIO01_08628 Colletotrichum fioriniae CFIO01_08628 N 0.000
CGGC5_8904 Colletotrichum gloeosporioides CGGC5_8904 N 0.000
CH063_07573 Colletotrichum higginsianum CH063_07573 N 0.000
CMQ_1388 Grosmannia clavigera CMQ_1388 N 0.000
Cob_02086 Colletotrichum orbiculare Cob_02086 N 0.000
Cob_09017 Colletotrichum orbiculare Cob_09017 N 0.000
CSUB01_05917 Colletotrichum sublineola CSUB01_05917 N 0.000
estExt_Genewise1.C_sca_17_chr8_1_00336 Nectria haematococca estExt_Genewise1.C_sca_17_chr8_1_00336 N 0.000
e_gw1.00771.84.1 Aspergillus carbonarius e_gw1.00771.84.1 N 0.000
e_gw1.20.1612.1 Nectria haematococca e_gw1.20.1612.1 N 0.000
F503_02152 Ophiostoma piceae uamh F503_02152 N 0.000
FFUJ_00276 Fusarium fujikuroi FFUJ_00276 N 0.000
FFUJ_08949 Fusarium fujikuroi FFUJ_08949 N 0.000
FFUJ_10046 Fusarium fujikuroi FFUJ_10046 N 0.000
fgenesh1_pg.sca_11_chr8_3_0000285 Nectria haematococca fgenesh1_pg.sca_11_chr8_3_0000285 N 0.000
fgenesh1_pg.sca_5_chr5_3_0000637 Nectria haematococca fgenesh1_pg.sca_5_chr5_3_0000637 N 0.000
FGRRES_00217 Fusarium graminearum FGRRES_00217 N 0.000
FGRRES_09014 Fusarium graminearum FGRRES_09014 N 0.000
FOXG_01257 Fusarium oxysporum FOXG_01257 N 0.000
FOXG_09079 Fusarium oxysporum FOXG_09079 N 0.000
FOXG_13654 Fusarium oxysporum FOXG_13654 N 0.000
FPSE_06963 Fusarium pseudograminearum FPSE_06963 N 0.000
FVEG_06682 Fusarium verticillioides FVEG_06682 N 0.000
FVEG_11090 Fusarium verticillioides FVEG_11090 N 0.000
GGTG_12271 Gaeumannomyces graminis GGTG_12271 N 0.000
GLRG_04837 Colletotrichum graminicola GLRG_04837 N 0.000
HMPREF1624_05416 Sporothrix schenckii HMPREF1624_05416 N 0.000
M438DRAFT_402343 Aureobasidium pullulans M438DRAFT_402343 N 0.000
MAC_07316 Metarhizium acridum MAC_07316 N 0.000
MAJ_09423 Metarhizium majus MAJ_09423 N 0.000
MAM_07146 Metarhizium album MAM_07146 N 0.000
MANI_005235 Metarhizium anisopliae MANI_005235 N 0.000
MAPG_09611 Magnaporthe poae MAPG_09611 N 0.000
MBR_09867 Metarhizium brunneum MBR_09867 N 0.000
MGU_07052 Metarhizium guizhouense MGU_07052 N 0.000
NechaG44183 Fusarium solani NechaG44183 N 0.000
NechaG62595 Fusarium solani NechaG62595 N 0.000
NechaG80838 Fusarium solani NechaG80838 N 0.000
NechaG84217 Fusarium solani NechaG84217 N 0.000
OIDMADRAFT_169765 Oidiodendron maius OIDMADRAFT_169765 N 0.000
Pc16g10860 Penicillium chrysogenum Pc16g10860 N 0.000
PCH_Pc16g10860 Penicillium rubens PCH_Pc16g10860 N 0.000
PEX1_030190 Penicillium expansum PEX1_030190 N 0.000
PFICI_07869 Pestalotiopsis fici PFICI_07869 N 0.000
PITC_081790 Penicillium italicum PITC_081790 N 0.000
PMAA_080390 Penicillium marneffei PMAA_080390 N 0.000
PMAA_080390 Talaromyces marneffei PMAA_080390 N 0.000
PODANS_2_6520 Podospora anserina PODANS_2_6520 N 0.000
PV05_00069 Exophiala xenobiotica PV05_00069 N 0.000
PV07_02862 Cladophialophora immunda PV07_02862 N 0.000
PV11_06549 Exophiala sideris PV11_06549 N 0.000
S40285_02230 Stachybotrys chlorohalonata S40285_02230 N 0.000
S40288_03755 Stachybotrys chartarum S40288_03755 N 0.000
SAPIO_CDS8323 Scedosporium apiospermum SAPIO_CDS8323 N 0.000
SNOG_10852 Stagonospora nodorum SNOG_10852 N 0.000
SPBR_04675 Sporothrix brasiliensis SPBR_04675 N 0.000
THITE_2107846 Thielavia terrestris THITE_2107846 N 0.000
TRIATDRAFT_322087 Trichoderma atroviride TRIATDRAFT_322087 N 0.000
TSTA_114940 Talaromyces stipitatus TSTA_114940 N 0.000
U727_00431181161 Penicillium solitum U727_00431181161 N 0.000
UCRPA7_5783 Togninia minima UCRPA7_5783 N 0.000
VDAG_05079 Verticillium dahliae VDAG_05079 N 0.000
VDBG_06541 Verticillium alfalfae VDBG_06541 N 0.000
VDBG_06541 Verticillium albo atrum VDBG_06541 N 0.000
VHEMI08639 Torrubiella hemipterigena VHEMI08639 N 0.000
X797_009746 Metarhizium robertsii X797_009746 N 0.000
Z517_00469 Fonsecaea pedrosoi Z517_00469 N 0.000
Z518_11281 Rhinocladiella mackenziei Z518_11281 N 0.000