AQUA006870 (Anopheles quadriannulatus)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02257 (RFX_DNA_binding) IPR003150 AQUA006870 T319137_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rfx7
M00823_2.00 		Mus musculus
GTYRCYRNSB
VSNYRGYRAC		 PBM
Weirauch et al.(2013)
pTH3516 		0.688 0.544
Rfx7
M00187_2.00 		Mus musculus
BGTHDYYRNN
NNYRRHDACV		 PBM
Badis et al.(2009)
Rfxdc2_3516 		0.688 0.544
RFX7
M05729_2.00 		Homo sapiens
BGTTRCYRY
RYRGYAACV		 SELEX
Yin et al.(2017)
RFX7_eDBD_HT-SELEX 		0.688 0.544
RFX7
M05730_2.00 		Homo sapiens
BGTTGCYRB
VYRGCAACV		 SELEX
Yin et al.(2017)
RFX7_eDBD_Methyl-HT-SELEX 		0.688 0.544
RFX5
M03458_2.00 		Homo sapiens
BGTTRCYATRGYAACV
BGTTRCYATRGYAACV		 SELEX
Jolma et al.(2013)
RFX5_1 		0.672 0.468
RFX5
M03459_2.00 		Homo sapiens
BGTTGCYATGGYAACV
BGTTRCCATRGCAACV		 SELEX
Jolma et al.(2013)
RFX5_2 		0.672 0.468
RFX5
M03460_2.00 		Homo sapiens
BGTTGCYATGGYAACV
BGTTRCCATRGCAACV		 SELEX
Jolma et al.(2013)
RFX5_3 		0.672 0.468
RFX5
M05725_2.00 		Homo sapiens
BGTTRCYANGBGTTGCYRN
NYRGCAACVCNTRGYAACV		 SELEX
Yin et al.(2017)
RFX5_eDBD_HT-SELEX_1 		0.672 0.468
RFX5
M05726_2.00 		Homo sapiens
NYRVYAACSGTTRCYAN
NTRGYAACSGTTRBYRN		 SELEX
Yin et al.(2017)
RFX5_eDBD_HT-SELEX_2 		0.672 0.468
RFX5
M08009_2.00 		Homo sapiens
KCRBYDGTTRCYRRG
CYYRGYAACHRVYGM		 ChIP-seq
Gerstein et al.(2012)
GM12878_RFX5_Stanford 		0.672 0.468
RFX5
M08010_2.00 		Homo sapiens
DBVBYDGTTGCYRGGBVRR
YYBVCCYRGCAACHRVBVH		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_RFX5_Stanford 		0.672 0.468
RFX5
M08011_2.00 		Homo sapiens
TCVBYDGTTDCYRDG
CHYRGHAACHRVBGA		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_RFX5_Stanford 		0.672 0.468
RFX5
M08012_2.00 		Homo sapiens
YDGTTRCYRKGBVRV
BYBVCMYRGYAACHR		 ChIP-seq
Gerstein et al.(2012)
HepG2_RFX5_Stanford 		0.672 0.468
RFX5
M09364_2.00 		Homo sapiens
VNNVBYDGTTGCYRKGNVRV
BYBNCMYRGCAACHRVBNNB		 Misc
Kulakovskiy et al.(2013)
RFX5_HUMAN.H11MO.0.A 		0.672 0.468
RFX5
M09629_2.00 		Homo sapiens
NDGTTRCYADGV
BCHTRGYAACHN		 Misc
Heinz et al.(2010)
GM12878-Rfx5_GSE31477 		0.672 0.468
RFX5
M11249_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RFX5_03 		0.672 0.468
RFX5
M11250_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RFX5_05 		0.672 0.468
RFX5
M05727_2.00 		Homo sapiens
BGTYRYYRNGBGTTGYYRN
NYRRCAACVCNYRRYRACV		 SELEX
Yin et al.(2017)
RFX5_eDBD_Methyl-HT-SELEX_1 		0.672 0.468
RFX5
M05728_2.00 		Homo sapiens
NTRGYAASSGTYRBYRN
NYRVYRACSSTTRCYAN		 SELEX
Yin et al.(2017)
RFX5_eDBD_Methyl-HT-SELEX_2 		0.672 0.468
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AQUA006870-PA RFX 15 93

Links

Other RFX family TFs
Other Anopheles quadriannulatus TFs

222 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSBTAG00000031741 Bos taurus ENSBTAG00000031741 I
ENSBTAG00000034597 Bos taurus ENSBTAG00000034597 I
ENSBTAP00000031693-D1 Bos grunniens ENSBTAP00000031693-D1 I
ZNF322 Callithrix jacchus ENSCJAG00000011175 I
ENSCSAG00000019088 Chlorocebus sabaeus ENSCSAG00000019088 I
ZNF322 Dasypus novemcinctus ENSDNOG00000015534 I
ZNF322 Equus caballus ENSECAG00000000889 I
ZNF322 Homo sapiens ENSG00000181315 D
ZNF322 Gorilla gorilla ENSGGOG00000026339 I
ENSMICG00000017437 Microcebus murinus ENSMICG00000017437 I
ZNF322 Macaca mulatta ENSMMUG00000017480 I
ENSMPUG00000018606 Mustela putorius furo ENSMPUG00000018606 I
ENSOARG00000018679 Ovis aries ENSOARG00000018679 I
ENSOARG00000020046 Ovis aries ENSOARG00000020046 I
ENSP00000419728 Macaca fascicularis ENSP00000419728 I
ZNF322 Procavia capensis ENSPCAG00000014729 I
ENSPPYG00000016336 Pongo abelii ENSPPYG00000016336 I
ZNF322 Pan troglodytes ENSPTRG00000017837 I
Zfp322a Rattus norvegicus ENSRNOG00000017318 I
ZNF322 Sus scrofa ENSSSCG00000001156 I
ZNF322 Tupaia belangeri ENSTBEG00000012598 I