RUNX3 (Pan troglodytes)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ENSPTRG00000000351 T319474_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN

NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
1.000 1.000
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN

NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
1.000 1.000
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN

NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
1.000 1.000
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH

DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
1.000 1.000
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM

KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
1.000 1.000
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV

BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
1.000 1.000
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN

NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
1.000 1.000
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN

NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
1.000 1.000
RUNX3
M11252_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
1.000 1.000
RUNX3
M11253_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
1.000 1.000
RUNX3
M11254_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
1.000 1.000
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN

NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
1.000 1.000
Runx2
M01307_2.00
Mus musculus
NHDACCRCAN

NTGYGGTHDN
PBM
Lambert et al.(2019)
pTH9764
0.946 0.946
RUNX2
M03468_2.00
Homo sapiens
HRACCGCAAACCRCRD

HYGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX2_1
0.946 0.946
RUNX2
M03469_2.00
Homo sapiens
HRACCRCADWWACCRCAD

HTGYGGTWWHTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX2_2
0.946 0.946
RUNX2
M03470_2.00
Homo sapiens
WAACCRCAR

YTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX2_3
0.946 0.946
RUNX2
M05733_2.00
Homo sapiens
NHRACCRCADWAACCRCAVN

NBTGYGGTTWHTGYGGTYDN
SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX
0.946 0.946
RUNX2
M09370_2.00
Homo sapiens
MMHAACCACAVVMH

DKBBTGTGGTTDKK
Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A
0.946 0.946
Runx2
M09373_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A
0.946 0.946
RUNX2
M09630_2.00
Homo sapiens
NHVACCACANNN

NNNTGTGGTBDN
Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889
0.946 0.946
RUNX2
M11255_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q3
0.946 0.946
RUNX2
M11256_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q6
0.946 0.946
RUNX2
M11257_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSF2_Q6
0.946 0.946
RUNX2
M05734_2.00
Homo sapiens
NWAACCACRAAAACCACRRN

NYYGTGGTTTTYGTGGTTWN
SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX
0.946 0.946
Runx1
M08163_2.00
Mus musculus
HRRCCACARVN

NBYTGTGGYYD
ChIP-seq
Mathelier et al.(2014)
MA0002.2
0.931 0.931
RUNX1
M09371_2.00
Homo sapiens
NWAACCACARV

BYTGTGGTTWN
Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A
0.931 0.931
Runx1
M09372_2.00
Mus musculus
VWRACCACARVV

BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A
0.931 0.931
RUNX1
M09632_2.00
Homo sapiens
HAACCACADV

BHTGTGGTTD
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180
0.931 0.931
RUNX1
M09631_2.00
Homo sapiens
VCCACWTCCTBY

RVAGGAWGTGGB
Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954
0.931 0.931
Runx1
M09633_2.00
Mus musculus
NWAACCACAR

YTGTGGTTWN
Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178
0.931 0.931
RUNX1
M11258_2.00
Homo sapiens
ACCRCA

TGYGGT
Transfac
Matys et al.(2006)
V$AML1_01
0.931 0.931
RUNX1
M11259_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_01
0.931 0.931
RUNX1
M11260_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4_02
0.931 0.931
RUNX1
M11261_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q4
0.931 0.931
RUNX1
M11262_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q5
0.931 0.931
RUNX1
M11263_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML1_Q6
0.931 0.931
lz
M03964_2.00
Drosophila melanogaster
HRACCGCAAHM

KDTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_1
0.715 0.715
lz
M03965_2.00
Drosophila melanogaster
HVACCRCARWAACCRCAV

BTGYGGTTWYTGYGGTBD
SELEX
Nitta et al.(2015)
lz_2
0.715 0.715
lz
M03966_2.00
Drosophila melanogaster
WRACCRCAWTAACCRCAA

TTGYGGTTAWTGYGGTYW
SELEX
Nitta et al.(2015)
lz_3
0.715 0.715
lz
M03967_2.00
Drosophila melanogaster
HRACCGCAAAACCRCAR

YTGYGGTTTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_4
0.715 0.715
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000000614 Runt 68 197

Links

Other Runt family TFs
Other Pan troglodytes TFs

278 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003860 Calypte anna Aan_R003860 I 0.000
Aan_R015322 Calypte anna Aan_R015322 I 0.000
Afo_R009327 Aptenodytes forsteri Afo_R009327 I 0.000
Alligator_sinensis_CCG009150.1 Alligator sinensis Alligator_sinensis_CCG009150.1 I 0.000
Cmyd_10002066 Chelonia mydas Cmyd_10002066 I 0.000
Cmyd_10021444 Chelonia mydas Cmyd_10021444 I 0.000
NFATC1 Anolis carolinensis ENSACAG00000000941 I 0.000
NFATC4 Anolis carolinensis ENSACAG00000009230 I 0.000
NFATC3 Anolis carolinensis ENSACAG00000009839 I 0.000
ENSAMEG00000008086 Ailuropoda melanoleuca ENSAMEG00000008086 I 0.000
ENSAMEG00000010314 Ailuropoda melanoleuca ENSAMEG00000010314 I 0.000
ENSAMEG00000013329 Ailuropoda melanoleuca ENSAMEG00000013329 I 0.000
ENSAMEG00000015941 Ailuropoda melanoleuca ENSAMEG00000015941 I 0.000
ENSAMXG00000005881 Astyanax mexicanus ENSAMXG00000005881 I 0.000
ENSAMXG00000011048 Astyanax mexicanus ENSAMXG00000011048 I 0.000
ENSAMXG00000017687 Astyanax mexicanus ENSAMXG00000017687 I 0.000
ENSAMXG00000018016 Astyanax mexicanus ENSAMXG00000018016 I 0.000
ENSAPLG00000013017 Anas platyrhynchos ENSAPLG00000013017 I 0.000
NFATC1 Bos taurus ENSBTAG00000000656 I 0.000
NFATC3 Bos taurus ENSBTAG00000004368 I 0.000
NFATC4 Bos taurus ENSBTAG00000006366 I 0.000
NFATC2 Bos taurus ENSBTAG00000018270 I 0.000
ENSBTAP00000024318-D1 Bos grunniens ENSBTAP00000024318-D1 I 0.000
NFATC1 Canis familiaris ENSCAFG00000000011 I 0.000
NFATC2 Canis familiaris ENSCAFG00000011625 I 0.000
NFATC4 Canis familiaris ENSCAFG00000012375 I 0.000
NFATC3 Canis familiaris ENSCAFG00000020324 I 0.000
ENSCJAG00000000574 Callithrix jacchus ENSCJAG00000000574 I 0.000
NFATC4 Callithrix jacchus ENSCJAG00000006414 I 0.000
NFATC3 Callithrix jacchus ENSCJAG00000015726 I 0.000
NFATC1 Callithrix jacchus ENSCJAG00000023446 I 0.000
NFATC1 Cavia porcellus ENSCPOG00000003999 I 0.000
NFATC2 Cavia porcellus ENSCPOG00000012743 I 0.000
NFATC4 Cavia porcellus ENSCPOG00000014418 I 0.000
ENSCSAG00000004060 Chlorocebus sabaeus ENSCSAG00000004060 I 0.000
ENSCSAG00000015242 Chlorocebus sabaeus ENSCSAG00000015242 I 0.000
ENSCSAG00000015857 Chlorocebus sabaeus ENSCSAG00000015857 I 0.000
ENSCSAG00000018247 Chlorocebus sabaeus ENSCSAG00000018247 I 0.000
nfatc1 Danio rerio ENSDARG00000036168 I 0.000
nfatc3b Danio rerio ENSDARG00000051729 I 0.000
nfatc3a Danio rerio ENSDARG00000076297 I 0.000
NFATC2 Danio rerio ENSDARG00000100927 I 0.000
NFATC4 Dasypus novemcinctus ENSDNOG00000003323 I 0.000
NFATC2 Dasypus novemcinctus ENSDNOG00000015895 I 0.000
NFATC3 Dasypus novemcinctus ENSDNOG00000018583 I 0.000
ENSDORG00000002730 Dipodomys ordii ENSDORG00000002730 I 0.000
NFATC4 Equus caballus ENSECAG00000010992 I 0.000
NFATC3 Equus caballus ENSECAG00000014089 I 0.000
NFATC2 Equus caballus ENSECAG00000018997 I 0.000
NFATC1 Equus caballus ENSECAG00000019813 I 0.000
NFATC4 Echinops telfairi ENSETEG00000018556 I 0.000
ENSFALG00000007757 Ficedula albicollis ENSFALG00000007757 I 0.000
ENSFALG00000013042 Ficedula albicollis ENSFALG00000013042 I 0.000
ENSFALG00000013333 Ficedula albicollis ENSFALG00000013333 I 0.000
NFATC1 Felis catus ENSFCAG00000000884 I 0.000
NFATC2 Felis catus ENSFCAG00000000947 I 0.000
NFATC4 Felis catus ENSFCAG00000005602 I 0.000
NFATC3 Felis catus ENSFCAG00000030997 I 0.000
NFATC3 Homo sapiens ENSG00000072736 D 0.000
NFATC4 Homo sapiens ENSG00000100968 D 0.000
NFATC2 Homo sapiens ENSG00000101096 D 0.000
NFATC1 Homo sapiens ENSG00000131196 D 0.000
NFATC1 Gasterosteus aculeatus ENSGACG00000005481 I 0.000
ENSGACG00000008153 Gasterosteus aculeatus ENSGACG00000008153 I 0.000
nfatc3a Gasterosteus aculeatus ENSGACG00000016365 I 0.000
NFATC3 Gallus gallus ENSGALG00000003396 I 0.000
ENSGALG00000012654 Gallus gallus ENSGALG00000012654 I 0.000
NFATC1 Gorilla gorilla ENSGGOG00000006879 I 0.000
NFATC4 Gorilla gorilla ENSGGOG00000008797 I 0.000
NFATC2 Gorilla gorilla ENSGGOG00000024518 I 0.000
ENSGMOG00000017004 Gadus morhua ENSGMOG00000017004 I 0.000
ENSLACG00000001332 Latimeria chalumnae ENSLACG00000001332 I 0.000
NFATC1 Loxodonta africana ENSLAFG00000008297 I 0.000
NFATC4 Loxodonta africana ENSLAFG00000014579 I 0.000
NFATC3 Loxodonta africana ENSLAFG00000014599 I 0.000
NFATC2 Loxodonta africana ENSLAFG00000015276 I 0.000
ENSLOCG00000007875 Lepisosteus oculatus ENSLOCG00000007875 I 0.000
ENSLOCG00000008087 Lepisosteus oculatus ENSLOCG00000008087 I 0.000
ENSMEUG00000011495 Macropus eugenii ENSMEUG00000011495 I 0.000
NFATC1 Meleagris gallopavo ENSMGAG00000002215 D 0.000
NFATC3 Meleagris gallopavo ENSMGAG00000003992 I 0.000
NFATC4 Microcebus murinus ENSMICG00000014210 I 0.000
NFATC1 Myotis lucifugus ENSMLUG00000001296 I 0.000
NFATC3 Myotis lucifugus ENSMLUG00000005918 I 0.000
NFATC4 Myotis lucifugus ENSMLUG00000011274 I 0.000
NFATC2 Myotis lucifugus ENSMLUG00000014668 I 0.000
NFATC3 Macaca mulatta ENSMMUG00000021843 I 0.000
NFATC1 Macaca mulatta ENSMMUG00000022596 I 0.000
ENSMMUP00000029747 Macaca fascicularis ENSMMUP00000029747 I 0.000
NFATC4 Monodelphis domestica ENSMODG00000002992 I 0.000
NFATC1 Monodelphis domestica ENSMODG00000012018 D 0.000
ENSMPUG00000005665 Mustela putorius furo ENSMPUG00000005665 I 0.000
ENSMPUG00000006942 Mustela putorius furo ENSMPUG00000006942 I 0.000
ENSMPUG00000016650 Mustela putorius furo ENSMPUG00000016650 I 0.000
ENSMPUG00000017545 Mustela putorius furo ENSMPUG00000017545 I 0.000
Nfatc4 Mus musculus ENSMUSG00000023411 D 0.000
Nfatc2 Mus musculus ENSMUSG00000027544 D 0.000
Nfatc3 Mus musculus ENSMUSG00000031902 D 0.000
Nfatc1 Mus musculus ENSMUSG00000033016 D 0.000
ENSNLEG00000005116 Nomascus leucogenys ENSNLEG00000005116 I 0.000
ENSNLEG00000007002 Nomascus leucogenys ENSNLEG00000007002 I 0.000
ENSNLEG00000008307 Nomascus leucogenys ENSNLEG00000008307 I 0.000
ENSNLEG00000015487 Nomascus leucogenys ENSNLEG00000015487 I 0.000
ENSOARG00000003342 Ovis aries ENSOARG00000003342 I 0.000
ENSOARG00000004215 Ovis aries ENSOARG00000004215 I 0.000
ENSOARG00000014239 Ovis aries ENSOARG00000014239 I 0.000
ENSOARG00000019084 Ovis aries ENSOARG00000019084 I 0.000
NFATC3 Oryctolagus cuniculus ENSOCUG00000010052 I 0.000
NFATC2 Oryctolagus cuniculus ENSOCUG00000012556 I 0.000
NFATC4 Oryctolagus cuniculus ENSOCUG00000015145 I 0.000
NFATC4 Otolemur garnettii ENSOGAG00000006090 I 0.000
NFATC1 Otolemur garnettii ENSOGAG00000008159 I 0.000
NFATC2 Otolemur garnettii ENSOGAG00000013787 I 0.000
NFATC3 Otolemur garnettii ENSOGAG00000032524 I 0.000
ENSONIG00000002481 Oreochromis niloticus ENSONIG00000002481 I 0.000
ENSONIG00000007307 Oreochromis niloticus ENSONIG00000007307 I 0.000
ENSONIG00000010613 Oreochromis niloticus ENSONIG00000010613 I 0.000
ENSONIG00000013792 Oreochromis niloticus ENSONIG00000013792 I 0.000
NFATC1 Ochotona princeps ENSOPRG00000008019 I 0.000
NFATC4 Ochotona princeps ENSOPRG00000016715 I 0.000
nfatc1 Oryzias latipes ENSORLG00000008055 I 0.000
nfatc3a Oryzias latipes ENSORLG00000011964 I 0.000
ENSP00000300659 Macaca fascicularis ENSP00000300659 I 0.000
ENSP00000300659-D1 Bos grunniens ENSP00000300659-D1 I 0.000
ENSP00000379330 Macaca fascicularis ENSP00000379330 I 0.000
ENSP00000388910 Macaca fascicularis ENSP00000388910 I 0.000
ENSP00000388910-D1 Bos grunniens ENSP00000388910-D1 I 0.000
ENSPANG00000014019 Papio anubis ENSPANG00000014019 I 0.000
ENSPANG00000018698 Papio anubis ENSPANG00000018698 I 0.000
ENSPANG00000020004 Papio anubis ENSPANG00000020004 I 0.000
ENSPANG00000021791 Papio anubis ENSPANG00000021791 I 0.000
NFATC3 Procavia capensis ENSPCAG00000005143 I 0.000
ENSPFOG00000006116 Poecilia formosa ENSPFOG00000006116 I 0.000
ENSPFOG00000019133 Poecilia formosa ENSPFOG00000019133 I 0.000
ENSPFOG00000022114 Poecilia formosa ENSPFOG00000022114 N 0.000
ENSPPYG00000005704 Pongo abelii ENSPPYG00000005704 I 0.000
ENSPPYG00000007483 Pongo abelii ENSPPYG00000007483 I 0.000
ENSPPYG00000009255 Pongo abelii ENSPPYG00000009255 I 0.000
ENSPPYG00000011135 Pongo abelii ENSPPYG00000011135 I 0.000
ENSPSIG00000011711 Pelodiscus sinensis ENSPSIG00000011711 I 0.000
NFATC4 Pan troglodytes ENSPTRG00000006218 I 0.000
NFATC3 Pan troglodytes ENSPTRG00000008260 I 0.000
NFATC1 Pan troglodytes ENSPTRG00000010129 I 0.000
NFATC2 Pan troglodytes ENSPTRG00000013628 I 0.000
NFATC2 Pteropus vampyrus ENSPVAG00000003626 I 0.000
NFATC3 Pteropus vampyrus ENSPVAG00000016625 I 0.000
Nfatc1 Rattus norvegicus ENSRNOG00000017146 I 0.000
Nfatc4 Rattus norvegicus ENSRNOG00000020482 I 0.000
Nfatc3 Rattus norvegicus ENSRNOG00000054264 I 0.000
ENSSHAG00000006860 Sarcophilus harrisii ENSSHAG00000006860 I 0.000
ENSSHAG00000009139 Sarcophilus harrisii ENSSHAG00000009139 I 0.000
ENSSHAG00000010150 Sarcophilus harrisii ENSSHAG00000010150 I 0.000
NFATC4 Sus scrofa ENSSSCG00000001986 I 0.000
NFATC2 Sus scrofa ENSSSCG00000007477 I 0.000
ENSSTOG00000002871 Ictidomys tridecemlineatus ENSSTOG00000002871 I 0.000
ENSSTOG00000008168 Ictidomys tridecemlineatus ENSSTOG00000008168 I 0.000
ENSSTOG00000013460 Ictidomys tridecemlineatus ENSSTOG00000013460 I 0.000
ENSSTOG00000022700 Ictidomys tridecemlineatus ENSSTOG00000022700 I 0.000
NFATC2 Tupaia belangeri ENSTBEG00000004525 I 0.000
NFATC1 Taeniopygia guttata ENSTGUG00000006621 I 0.000
NFATC3 Taeniopygia guttata ENSTGUG00000007006 I 0.000
nfatc1 Tetraodon nigroviridis ENSTNIG00000002929 I 0.000
nfatc3a Tetraodon nigroviridis ENSTNIG00000011351 I 0.000
nfatc3a Takifugu rubripes ENSTRUG00000007833 I 0.000
ENSTRUG00000017422 Takifugu rubripes ENSTRUG00000017422 I 0.000
ENSTSYG00000010321 Tarsius syrichta ENSTSYG00000010321 I 0.000
NFATC4 Tursiops truncatus ENSTTRG00000008642 I 0.000
NFATC3 Tursiops truncatus ENSTTRG00000014611 I 0.000
NFATC1 Tursiops truncatus ENSTTRG00000016530 I 0.000
ENSVPAG00000000575 Vicugna pacos ENSVPAG00000000575 I 0.000
NFATC3 Vicugna pacos ENSVPAG00000002581 I 0.000
ENSXMAG00000009087 Xiphophorus maculatus ENSXMAG00000009087 I 0.000
ENSXMAG00000017348 Xiphophorus maculatus ENSXMAG00000017348 I 0.000
Gfo_R000615 Geospiza fortis Gfo_R000615 I 0.000
Gfo_R015940 Geospiza fortis Gfo_R015940 I 0.000
Myotis_brandtii_NFATC1_10034214 Myotis brandtii Myotis_brandtii_NFATC1_10034214 I 0.000
Myotis_brandtii_NFATC2_10026354 Myotis brandtii Myotis_brandtii_NFATC2_10026354 I 0.000
Myotis_brandtii_Nfatc4_10003693 Myotis brandtii Myotis_brandtii_Nfatc4_10003693 I 0.000
Pvit_04251 Pogona vitticeps Pvit_04251 I 0.000
Pvit_05133 Pogona vitticeps Pvit_05133 I 0.000
Pvit_07799 Pogona vitticeps Pvit_07799 I 0.000
Tal_R012379 Tyto alba Tal_R012379 I 0.000
nfatc3 Xenopus tropicalis XB-GENE-493918 I 0.000
nfatc3.S Xenopus laevis XB-GENE-866300 I 0.000
nfatc4 Xenopus tropicalis XB-GENE-876539 I 0.000
nfatc1 Xenopus tropicalis XB-GENE-876756 D 0.000
nfatc1.L Xenopus laevis XB-GENE-876764 I 0.000