ENSXMAG00000006715 (Xiphophorus maculatus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ENSXMAG00000006715 T319519_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.738 0.738
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.738 0.738
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.738 0.738
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.738 0.738
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.738 0.738
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.738 0.738
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.738 0.738
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.738 0.738
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.738 0.738
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.738 0.738
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.738 0.738
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.738 0.738
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.723 0.723
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.723 0.723
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.723 0.723
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.723 0.723
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.723 0.723
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.723 0.723
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.723 0.723
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.723 0.723
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.723 0.723
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.723 0.723
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.723 0.723
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.723 0.723
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.723 0.723
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.723 0.723
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.723 0.723
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.723 0.723
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.723 0.723
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.723 0.723
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.723 0.723
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.723 0.723
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.723 0.723
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.723 0.723
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.723 0.723
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000006725 Runt 42 172

Links

Other Runt family TFs
Other Xiphophorus maculatus TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R000409 Calypte anna Aan_R000409 N 0.000
Afo_R004342 Aptenodytes forsteri Afo_R004342 N 0.000
Brh_R004716 Buceros rhinoceros Brh_R004716 N 0.000
ZBED4 Anolis carolinensis ENSACAG00000009133 N 0.000
ENSAMXG00000025839 Astyanax mexicanus ENSAMXG00000025839 N 0.000
ENSAPLG00000001579 Anas platyrhynchos ENSAPLG00000001579 N 0.000
ZBED4 Canis familiaris ENSCAFG00000000714 N 0.000
ENSCPOG00000007711 Cavia porcellus ENSCPOG00000007711 N 0.000
ENSCSAG00000019288 Chlorocebus sabaeus ENSCSAG00000019288 N 0.000
zbed4 Danio rerio ENSDARG00000024306 N 0.000
ZBED4 Dasypus novemcinctus ENSDNOG00000018932 N 0.000
ENSFALG00000015280 Ficedula albicollis ENSFALG00000015280 N 0.000
ZBED4 Homo sapiens ENSG00000100426 N 0.000
zbed4 Gasterosteus aculeatus ENSGACG00000019008 N 0.000
ENSGALG00000008547 Gallus gallus ENSGALG00000008547 N 0.000
ENSLACG00000007168 Latimeria chalumnae ENSLACG00000007168 N 0.000
ZBED4 Loxodonta africana ENSLAFG00000017972 N 0.000
ENSLOCG00000017908 Lepisosteus oculatus ENSLOCG00000017908 N 0.000
ENSMEUG00000014660 Macropus eugenii ENSMEUG00000014660 N 0.000
ZBED4 Macaca mulatta ENSMMUG00000018833 N 0.000
ZBED4 Monodelphis domestica ENSMODG00000025433 N 0.000
ENSMPUG00000018768 Mustela putorius furo ENSMPUG00000018768 N 0.000
Zbed4 Mus musculus ENSMUSG00000034333 N 0.000
ENSNLEG00000018235 Nomascus leucogenys ENSNLEG00000018235 N 0.000
ENSOCUG00000029472 Oryctolagus cuniculus ENSOCUG00000029472 N 0.000
ZBED4 Otolemur garnettii ENSOGAG00000013251 N 0.000
ENSONIG00000009795 Oreochromis niloticus ENSONIG00000009795 N 0.000
ENSP00000216268 Macaca fascicularis ENSP00000216268 N 0.000
ENSPANG00000010852 Papio anubis ENSPANG00000010852 N 0.000
ENSPFOG00000020326 Poecilia formosa ENSPFOG00000020326 N 0.000
ENSPPYG00000011967 Pongo abelii ENSPPYG00000011967 N 0.000
ENSPSIG00000007193 Pelodiscus sinensis ENSPSIG00000007193 N 0.000
ZBED4 Pan troglodytes ENSPTRG00000014522 N 0.000
ZBED4 Pteropus vampyrus ENSPVAG00000005134 N 0.000
Zbed4 Rattus norvegicus ENSRNOG00000004588 N 0.000
ZBED4 Sorex araneus ENSSARG00000001048 N 0.000
ENSSTOG00000023379 Ictidomys tridecemlineatus ENSSTOG00000023379 N 0.000
zbed4 Tetraodon nigroviridis ENSTNIG00000006775 N 0.000
ZBED4 Tursiops truncatus ENSTTRG00000009815 N 0.000
ENSXMAG00000019580 Xiphophorus maculatus ENSXMAG00000019580 N 0.000
Gfo_R008679 Geospiza fortis Gfo_R008679 N 0.000
Myotis_brandtii_ZBED4_10004868 Myotis brandtii Myotis_brandtii_ZBED4_10004868 N 0.000
Pvit_16079 Pogona vitticeps Pvit_16079 N 0.000
Tal_R001537 Tyto alba Tal_R001537 N 0.000
zbed4 Xenopus tropicalis XB-GENE-6076969 N 0.000
XP_002932233 Xenopus tropicalis XP_002932233 N 0.000