run (Drosophila erecta)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 FBgn0085118 T319529_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		1.000 1.000
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.723 0.723
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.723 0.723
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.723 0.723
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.723 0.723
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0138242 Runt 109 238

Links

Other Runt family TFs
Other Drosophila erecta TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC186606.4_FG003 Zea mays AC186606.4_FG003 I
BGIOSGA008968 Oryza indica BGIOSGA008968 I
BGIOSGA026766 Oryza indica BGIOSGA026766 I
BGIOSGA029595 Oryza indica BGIOSGA029595 I
Bo9g163740 Brassica oleracea Bo9g163740 I
Bra008670 Brassica rapa Bra008670 I
BRADI3G38840 Brachypodium distachyon BRADI3G38840 N
BRADI4G32920 Brachypodium distachyon BRADI4G32920 I
GRMZM2G020799 Zea mays GRMZM2G020799 I
GRMZM2G137532 Zea mays GRMZM2G137532 N
GRMZM2G144480 Zea mays GRMZM2G144480 I
GRMZM2G358796 Zea mays GRMZM2G358796 N
GSMUA_Achr5G05350_001 Musa acuminata GSMUA_Achr5G05350_001 I
GSMUA_Achr6G36230_001 Musa acuminata GSMUA_Achr6G36230_001 I
LPERR08G15570 Leersia perrieri LPERR08G15570 I
LPERR09G10020 Leersia perrieri LPERR09G10020 I
MLOC_6062 Hordeum vulgare MLOC_6062 N
MLOC_62430 Hordeum vulgare MLOC_62430 I
OB09G20300 Oryza brachyantha OB09G20300 I
OBART02G31030 Oryza barthii OBART02G31030 I
OBART08G18720 Oryza barthii OBART08G18720 I
OBART09G13750 Oryza barthii OBART09G13750 I
OBART09G13760 Oryza barthii OBART09G13760 I
OGLUM02G31690 Oryza glumaepatula OGLUM02G31690 I
OGLUM08G19690 Oryza glumaepatula OGLUM08G19690 I
OGLUM09G14340 Oryza glumaepatula OGLUM09G14340 I
OLONG_004835 Oryza longistaminata OLONG_004835 I
OLONG_013604 Oryza longistaminata OLONG_013604 I
OMERI02G29910 Oryza meridionalis OMERI02G29910 I
OMERI08G14760 Oryza meridionalis OMERI08G14760 I
ONIVA02G34180 Oryza nivara ONIVA02G34180 I
ONIVA08G20730 Oryza nivara ONIVA08G20730 I
ONIVA09G14270 Oryza nivara ONIVA09G14270 I
OPUNC02G28720 Oryza punctata OPUNC02G28720 I
OPUNC08G16670 Oryza punctata OPUNC08G16670 I
OPUNC09G12140 Oryza punctata OPUNC09G12140 I
OPUNC09G12240 Oryza punctata OPUNC09G12240 I
ORGLA02G0265300 Oryza glaberrima ORGLA02G0265300 I
ORGLA08G0162900 Oryza glaberrima ORGLA08G0162900 I
ORGLA09G0104900 Oryza glaberrima ORGLA09G0104900 I
ORUFI02G32700 Oryza rufipogon ORUFI02G32700 I
ORUFI08G08020 Oryza rufipogon ORUFI08G08020 I
ORUFI09G14730 Oryza rufipogon ORUFI09G14730 I
OS02G0728001 Oryza sativa OS02G0728001 D
OS08G0487100 Oryza sativa OS08G0487100 I
OS09G0474000 Oryza sativa OS09G0474000 I
Pavir.Ba01782 Panicum virgatum Pavir.Ba01782 I
Pavir.Bb02514 Panicum virgatum Pavir.Bb02514 I
Pavir.Fa00602 Panicum virgatum Pavir.Fa00602 I
Pavir.Fb01824 Panicum virgatum Pavir.Fb01824 I
PGSC0003DMG400007523 Solanum tuberosum PGSC0003DMG400007523 I
Sb07g028900 Sorghum bicolor Sb07g028900 I
Sb07g028960 Sorghum bicolor Sb07g028960 I
Si014433m.g Setaria italica Si014433m.g I
Si019897m.g Setaria italica Si019897m.g I
Si031238m.g Setaria italica Si031238m.g I
Traes_5BL_C559EFC8A Triticum aestivum Traes_5BL_C559EFC8A I
Traes_5DL_591F8EFBD Triticum aestivum Traes_5DL_591F8EFBD I
Traes_6AL_E0ED0DE45 Triticum aestivum Traes_6AL_E0ED0DE45 I
Traes_6DL_77ACE1279 Triticum aestivum Traes_6DL_77ACE1279 I