CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GK20052 *(Drosophila willistoni)* Runt
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00853 (Runt)	IPR013524	FBgn0222049	T319561_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
RUNX3 M03464_2.00	Homo sapiens	HRACCGCAAACCRCAN	NTGYGGTTTGCGGTYD	SELEX Jolma et al.(2013) RUNX3_1	0.762	0.762
RUNX3 M03465_2.00	Homo sapiens	WAACCRCARN	NYTGYGGTTW	SELEX Jolma et al.(2013) RUNX3_2	0.762	0.762
RUNX3 M03466_2.00	Homo sapiens	HDACCRCADWAACCRCRN	NYGYGGTTWHTGYGGTHD	SELEX Jolma et al.(2013) RUNX3_3	0.762	0.762
RUNX3 M03467_2.00	Homo sapiens	HRACCRCAAH	DTTGYGGTYD	SELEX Jolma et al.(2013) RUNX3_4	0.762	0.762
RUNX3 M02751_2.00	Homo sapiens	WACCRCAM	KTGYGGTW	SELEX Jolma et al.(2010) RUNX3_monomer	0.762	0.762
lz M03964_2.00	Drosophila melanogaster	HRACCGCAAHM	KDTTGCGGTYD	SELEX Nitta et al.(2015) lz_1	0.762	0.762
lz M03965_2.00	Drosophila melanogaster	HVACCRCARWAACCRCAV	BTGYGGTTWYTGYGGTBD	SELEX Nitta et al.(2015) lz_2	0.762	0.762
lz M03966_2.00	Drosophila melanogaster	WRACCRCAWTAACCRCAA	TTGYGGTTAWTGYGGTYW	SELEX Nitta et al.(2015) lz_3	0.762	0.762
lz M03967_2.00	Drosophila melanogaster	HRACCGCAAAACCRCAR	YTGYGGTTTTGCGGTYD	SELEX Nitta et al.(2015) lz_4	0.762	0.762
RUNX3 M05731_2.00	Homo sapiens	YWAACCGCAAAAACCGCARV	BYTGCGGTTTTTGCGGTTWR	SELEX Yin et al.(2017) RUNX3_FL_HT-SELEX	0.762	0.762
RUNX3 M09369_2.00	Homo sapiens	HAACCACARN	NYTGTGGTTD	Misc Kulakovskiy et al.(2013) RUNX3_HUMAN.H11MO.0.A	0.762	0.762
Runx3 M09374_2.00	Mus musculus	NHRACCACARVN	NBYTGTGGTYDN	Misc Kulakovskiy et al.(2013) RUNX3_MOUSE.H11MO.0.A	0.762	0.762
RUNX3 M11252_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML2_Q3_01	0.762	0.762
RUNX3 M11253_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML2_Q3	0.762	0.762
RUNX3 M11254_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML2_Q4	0.762	0.762
RUNX3 M05732_2.00	Homo sapiens	HWAACCACRAAAACCACRARN	NYTYGTGGTTTTYGTGGTTWD	SELEX Yin et al.(2017) RUNX3_FL_Methyl-HT-SELEX	0.762	0.762
Runx1 M08163_2.00	Mus musculus	HRRCCACARVN	NBYTGTGGYYD	ChIP-seq Mathelier et al.(2014) MA0002.2	0.754	0.754
RUNX1 M09371_2.00	Homo sapiens	NWAACCACARV	BYTGTGGTTWN	Misc Kulakovskiy et al.(2013) RUNX1_HUMAN.H11MO.0.A	0.754	0.754
Runx1 M09372_2.00	Mus musculus	VWRACCACARVV	BBYTGTGGTYWB	Misc Kulakovskiy et al.(2013) RUNX1_MOUSE.H11MO.0.A	0.754	0.754
RUNX1 M09632_2.00	Homo sapiens	HAACCACADV	BHTGTGGTTD	Misc Heinz et al.(2010) Jurkat-RUNX1_GSE29180	0.754	0.754
RUNX1 M09631_2.00	Homo sapiens	VCCACWTCCTBY	RVAGGAWGTGGB	Misc Heinz et al.(2010) Jurkat-RUNX1_GSE17954	0.754	0.754
Runx1 M09633_2.00	Mus musculus	NWAACCACAR	YTGTGGTTWN	Misc Heinz et al.(2010) HPC7-Runx1_GSE22178	0.754	0.754
RUNX1 M11258_2.00	Homo sapiens	ACCRCA	TGYGGT	Transfac Matys et al.(2006) V$AML1_01	0.754	0.754
RUNX1 M11259_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML1_Q4_01	0.754	0.754
RUNX1 M11260_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML1_Q4_02	0.754	0.754
RUNX1 M11261_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML1_Q4	0.754	0.754
RUNX1 M11262_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML1_Q5	0.754	0.754
RUNX1 M11263_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML1_Q6	0.754	0.754
Runx2 M01307_2.00	Mus musculus	NHDACCRCAN	NTGYGGTHDN	PBM Lambert et al.(2019) pTH9764	0.746	0.746
RUNX2 M03468_2.00	Homo sapiens	HRACCGCAAACCRCRD	HYGYGGTTTGCGGTYD	SELEX Jolma et al.(2013) RUNX2_1	0.746	0.746
RUNX2 M03469_2.00	Homo sapiens	HRACCRCADWWACCRCAD	HTGYGGTWWHTGYGGTYD	SELEX Jolma et al.(2013) RUNX2_2	0.746	0.746
RUNX2 M03470_2.00	Homo sapiens	WAACCRCAR	YTGYGGTTW	SELEX Jolma et al.(2013) RUNX2_3	0.746	0.746
RUNX2 M05733_2.00	Homo sapiens	NHRACCRCADWAACCRCAVN	NBTGYGGTTWHTGYGGTYDN	SELEX Yin et al.(2017) RUNX2_eDBD_HT-SELEX	0.746	0.746
RUNX2 M09370_2.00	Homo sapiens	MMHAACCACAVVMH	DKBBTGTGGTTDKK	Misc Kulakovskiy et al.(2013) RUNX2_HUMAN.H11MO.0.A	0.746	0.746
Runx2 M09373_2.00	Mus musculus	VWRACCACARVV	BBYTGTGGTYWB	Misc Kulakovskiy et al.(2013) RUNX2_MOUSE.H11MO.0.A	0.746	0.746
RUNX2 M09630_2.00	Homo sapiens	NHVACCACANNN	NNNTGTGGTBDN	Misc Heinz et al.(2010) PCa-RUNX2_GSE33889	0.746	0.746
RUNX2 M11255_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML3_Q3	0.746	0.746
RUNX2 M11256_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML3_Q6	0.746	0.746
RUNX2 M11257_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$OSF2_Q6	0.746	0.746
RUNX2 M05734_2.00	Homo sapiens	NWAACCACRAAAACCACRRN	NYYGTGGTTTTYGTGGTTWN	SELEX Yin et al.(2017) RUNX2_eDBD_Methyl-HT-SELEX	0.746	0.746
run M06444_2.00	Drosophila melanogaster	WAACCGCAR	YTGCGGTTW	B1H Zhu et al.(2011) run_Bgb_NBT_FBgn0003300	0.708	0.708
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
FBpp0249195	Runt	96	225	LGDFLTEHPGELIRTSSPLFVCTVLPPHWRSNKTLPVAFKVVSLGDIMDGTMVTVRAGNDENYCAELRNCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTITVSTNPPHIATYNKAIKVTVDGPREPRSKT

Links
Other Runt family TFs
Other *Drosophila willistoni* TFs

291 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
Aan_R001830	Calypte anna	Aan_R001830	N	0.000
Afo_R015384	Aptenodytes forsteri	Afo_R015384	N	0.000
Alligator_sinensis_CCG000560.1	Alligator sinensis	Alligator_sinensis_CCG000560.1	N	0.000
ENSAMEG00000014340	Ailuropoda melanoleuca	ENSAMEG00000014340	N	0.000
ENSAPLG00000004997	Anas platyrhynchos	ENSAPLG00000004997	N	0.000
MXD4	Bos taurus	ENSBTAG00000015209	N	0.000
MXD4	Canis familiaris	ENSCAFG00000014873	N	0.000
MXD4	Callithrix jacchus	ENSCJAG00000014432	N	0.000
MXD4	Cavia porcellus	ENSCPOG00000022492	N	0.000
ENSCSAG00000015741	Chlorocebus sabaeus	ENSCSAG00000015741	N	0.000
mxd1	Danio rerio	ENSDARG00000032039	N	0.000
mxd4	Danio rerio	ENSDARG00000054031	N	0.000
MXD4	Equus caballus	ENSECAG00000002580	N	0.000
MXD4	Echinops telfairi	ENSETEG00000005547	N	0.000
ENSFALG00000009868	Ficedula albicollis	ENSFALG00000009868	N	0.000
MXD4	Felis catus	ENSFCAG00000012927	N	0.000
MXD4	Homo sapiens	ENSG00000123933	N	0.000
mxd1	Gasterosteus aculeatus	ENSGACG00000013215	I	0.000
mxd4	Gasterosteus aculeatus	ENSGACG00000017587	N	0.000
MXD4	Gallus gallus	ENSGALG00000015688	N	0.000
MXD4	Gorilla gorilla	ENSGGOG00000000747	N	0.000
ENSLACG00000006663	Latimeria chalumnae	ENSLACG00000006663	N	0.000
MXD4	Loxodonta africana	ENSLAFG00000026709	N	0.000
ENSLOCG00000002303	Lepisosteus oculatus	ENSLOCG00000002303	N	0.000
ENSLOCG00000015320	Lepisosteus oculatus	ENSLOCG00000015320	I	0.000
ENSMEUG00000013427	Macropus eugenii	ENSMEUG00000013427	N	0.000
MXD4	Meleagris gallopavo	ENSMGAG00000013027	N	0.000
ENSMMUG00000001160	Macaca mulatta	ENSMMUG00000001160	N	0.000
MXD4	Monodelphis domestica	ENSMODG00000004033	N	0.000
ENSMPUG00000010989	Mustela putorius furo	ENSMPUG00000010989	N	0.000
Mxd4	Mus musculus	ENSMUSG00000037235	N	0.000
MXD4	Oryctolagus cuniculus	ENSOCUG00000005063	N	0.000
MXD4	Otolemur garnettii	ENSOGAG00000011305	N	0.000
ENSONIG00000015871	Oreochromis niloticus	ENSONIG00000015871	I	0.000
ENSONIG00000017548	Oreochromis niloticus	ENSONIG00000017548	N	0.000
mxd4	Oryzias latipes	ENSORLG00000006439	N	0.000
mxd1	Oryzias latipes	ENSORLG00000015461	I	0.000
ENSP00000337889	Macaca fascicularis	ENSP00000337889	N	0.000
ENSPANG00000024535	Papio anubis	ENSPANG00000024535	N	0.000
MXD4	Procavia capensis	ENSPCAG00000014133	N	0.000
ENSPFOG00000004367	Poecilia formosa	ENSPFOG00000004367	I	0.000
ENSPFOG00000011915	Poecilia formosa	ENSPFOG00000011915	N	0.000
ENSPPYG00000014540	Pongo abelii	ENSPPYG00000014540	N	0.000
ENSPSIG00000016320	Pelodiscus sinensis	ENSPSIG00000016320	N	0.000
MXD4	Pan troglodytes	ENSPTRG00000015844	N	0.000
MXD4	Pteropus vampyrus	ENSPVAG00000011169	N	0.000
Mxd4	Rattus norvegicus	ENSRNOG00000015033	N	0.000
ENSSHAG00000011878	Sarcophilus harrisii	ENSSHAG00000011878	N	0.000
MXD4	Sus scrofa	ENSSSCG00000008687	N	0.000
ENSSTOG00000028770	Ictidomys tridecemlineatus	ENSSTOG00000028770	N	0.000
MXD4	Taeniopygia guttata	ENSTGUG00000010530	N	0.000
mxd1	Tetraodon nigroviridis	ENSTNIG00000000414	I	0.000
mxd4	Tetraodon nigroviridis	ENSTNIG00000018042	N	0.000
mxd4	Takifugu rubripes	ENSTRUG00000003046	N	0.000
MXD4	Tursiops truncatus	ENSTTRG00000013740	N	0.000
ENSXMAG00000004566	Xiphophorus maculatus	ENSXMAG00000004566	I	0.000
ENSXMAG00000005473	Xiphophorus maculatus	ENSXMAG00000005473	N	0.000
Gfo_R003202	Geospiza fortis	Gfo_R003202	N	0.000
Ogr18275	Ophisaurus gracilis	Ogr18275	N	0.000
Pvit_14853	Pogona vitticeps	Pvit_14853	N	0.000
Tal_R007717	Tyto alba	Tal_R007717	N	0.000
mxd4.L	Xenopus laevis	XB-GENE-6252709	N	0.000
mxd4.S	Xenopus laevis	XB-GENE-6256011	N	0.000
mxd4	Xenopus tropicalis	XB-GENE-6257573	N	0.000
mxd1	Xenopus tropicalis	XB-GENE-943715	N	0.000
mxd1.L	Xenopus laevis	XB-GENE-943720	N	0.000

GK20052 (Drosophila willistoni) Runt

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

291 Related TFs

GK20052 **(Drosophila willistoni)
Runt**