GB52718 (Apis mellifera)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 GB52718 T319570_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.800 0.800
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.800 0.800
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.800 0.800
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.800 0.800
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.754 0.754
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.754 0.754
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.754 0.754
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.754 0.754
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.754 0.754
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.754 0.754
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.754 0.754
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.754 0.754
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.754 0.754
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.754 0.754
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.754 0.754
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.754 0.754
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.746 0.746
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.746 0.746
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.746 0.746
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.746 0.746
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.746 0.746
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.746 0.746
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.746 0.746
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.746 0.746
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.746 0.746
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.746 0.746
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.746 0.746
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.746 0.746
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.738 0.738
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.738 0.738
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.738 0.738
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.738 0.738
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.738 0.738
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.738 0.738
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.738 0.738
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.738 0.738
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.738 0.738
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.738 0.738
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.738 0.738
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.738 0.738
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GB52718-PA Runt 90 219

Links

Other Runt family TFs
Other Apis mellifera TFs

288 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_06375 Capronia coronata A1O1_06375 I
A1O3_09996 Capronia epimyces A1O3_09996 I
A1O5_08901 Cladophialophora psammophila A1O5_08901 I
A1O7_06013 Cladophialophora yegresii A1O7_06013 I
A1O9_07978 Exophiala aquamarina A1O9_07978 I
AB07784.1 Alternaria brassicicola AB07784.1 I
ACRE_056110 Acremonium chrysogenum ACRE_056110 I
ARB_03655 Arthroderma benhamiae ARB_03655 I
AUEXF2481DRAFT_33171 Aureobasidium subglaciale AUEXF2481DRAFT_33171 I
BAUCODRAFT_190174 Baudoinia compniacensis BAUCODRAFT_190174 I
BBA_02099 Beauveria bassiana BBA_02099 I
Bcin11g02290 Botrytis cinerea Bcin11g02290 I
BDDG_01232 Blastomyces dermatitidis BDDG_01232 I
ACLA_023830 Aspergillus clavatus CADACLAG00002657 I
CADAFLAG00008215 Aspergillus flavus CADAFLAG00008215 I
AFUA_1G11800 Aspergillus fumigatus CADAFUAG00007601 I
CADANGAG00006720 Aspergillus niger CADANGAG00006720 I
ANIA_01114 Aspergillus nidulans CADANIAG00001514 I
ATEG_00373 Aspergillus terreus CADATEAG00007187 I
NFIA_013750 Neosartorya fischeri CADNFIAG00000692 I
CCM_06899 Cordyceps militaris CCM_06899 I
CFIO01_08807 Colletotrichum fioriniae CFIO01_08807 I
CH063_12530 Colletotrichum higginsianum CH063_12530 I
CHGG_00821 Chaetomium globosum CHGG_00821 I
CIMG_07010 Coccidioides immitis CIMG_07010 I
CMQ_8079 Grosmannia clavigera CMQ_8079 I
Cob_01636 Colletotrichum orbiculare Cob_01636 I
COCC4DRAFT_128615 Bipolaris maydis COCC4DRAFT_128615 I
COCCADRAFT_8201 Bipolaris zeicola COCCADRAFT_8201 I
COCMIDRAFT_34913 Bipolaris oryzae COCMIDRAFT_34913 I
COCSADRAFT_163131 Bipolaris sorokiniana COCSADRAFT_163131 I
COCVIDRAFT_25662 Bipolaris victoriae COCVIDRAFT_25662 I
CPC735_033720 Coccidioides posadasii CPC735_033720 I
CSUB01_01372 Colletotrichum sublineola CSUB01_01372 I
DOTSEDRAFT_68329 Dothistroma septosporum DOTSEDRAFT_68329 I
DRE_00265 Drechslerella stenobrocha DRE_00265 I
estExt_fgenesh1_pg.C_50693 Cryphonectria parasitica estExt_fgenesh1_pg.C_50693 I
estExt_fgenesh1_pg.C_60292 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_60292 I
estExt_fgenesh1_pg.C_chr_11274 Mycosphaerella graminicola estExt_fgenesh1_pg.C_chr_11274 I
estExt_Genewise1Plus.C_12488 Mycosphaerella fijiensis estExt_Genewise1Plus.C_12488 I
EURHEDRAFT_515289 Aspergillus ruber EURHEDRAFT_515289 I
F503_02328 Ophiostoma piceae uamh F503_02328 I
FFUJ_01329 Fusarium fujikuroi FFUJ_01329 I
fgenesh1_pg.sca_1_chr1_3_0000236 Nectria haematococca fgenesh1_pg.sca_1_chr1_3_0000236 I
fgenesh1_pm.00083_#_572 Aspergillus carbonarius fgenesh1_pm.00083_#_572 I
FGRRES_01139 Fusarium graminearum FGRRES_01139 I
FOXG_00250 Fusarium oxysporum FOXG_00250 I
FPSE_01025 Fusarium pseudograminearum FPSE_01025 I
FVEG_01266 Fusarium verticillioides FVEG_01266 I
G647_06523 Cladophialophora carrionii G647_06523 I
GGTG_10163 Gaeumannomyces graminis GGTG_10163 I
GLRG_03970 Colletotrichum graminicola GLRG_03970 I
GMDG_03925 Pseudogymnoascus destructans GMDG_03925 I
GSTUM_00009268001 Tuber melanosporum GSTUM_00009268001 I
H101_05541 Trichophyton interdigitale H101_05541 I
H102_00883 Trichophyton rubrum H102_00883 I
H105_00889 Trichophyton soudanense H105_00889 I
HMPREF1120_03828 Exophiala dermatitidis HMPREF1120_03828 I
HMPREF1541_01524 Cyphellophora europaea HMPREF1541_01524 I
HMPREF1624_05225 Sporothrix schenckii HMPREF1624_05225 I
LEMA_P051770.1 Leptosphaeria maculans LEMA_P051770.1 I
M437DRAFT_59197 Aureobasidium melanogenum M437DRAFT_59197 I
M438DRAFT_398194 Aureobasidium pullulans M438DRAFT_398194 I
MAC_05305 Metarhizium acridum MAC_05305 I
MAJ_02265 Metarhizium majus MAJ_02265 I
MAM_06778 Metarhizium album MAM_06778 I
MBM_05753 Marssonina brunnea MBM_05753 I
MCYG_01486 Microsporum canis MCYG_01486 I
MCYG_01486 Arthroderma otae MCYG_01486 I
MGG_00190 Magnaporthe oryzae MGG_00190 I
MGYG_04584 Microsporum gypseum MGYG_04584 I
MPH_03506 Macrophomina phaseolina MPH_03506 I
MYCFIDRAFT_209944 Pseudocercospora fijiensis MYCFIDRAFT_209944 I
Mycgr3G107535 Zymoseptoria tritici Mycgr3G107535 I
MYCTH_2136960 Myceliophthora thermophila MYCTH_2136960 I
NCU03077 Neurospora crassa NCU03077 D
NechaG74625 Fusarium solani NechaG74625 I
NEUTE1DRAFT_91395 Neurospora tetrasperma NEUTE1DRAFT_91395 I
OCS_06751 Ophiocordyceps sinensis OCS_06751 I
OIDMADRAFT_120781 Oidiodendron maius OIDMADRAFT_120781 I
PAAG_07715 Paracoccidioides sp lutzii PAAG_07715 I
PABG_00408 Paracoccidioides brasiliensis PABG_00408 I
Pc13g11100 Penicillium chrysogenum Pc13g11100 I
PCH_Pc13g11100 Penicillium rubens PCH_Pc13g11100 I
PDE_00349 Penicillium oxalicum PDE_00349 I
PDIP_28360 Penicillium digitatum PDIP_28360 I
PEX1_036250 Penicillium expansum PEX1_036250 I
PFICI_01479 Pestalotiopsis fici PFICI_01479 I
PMAA_043170 Talaromyces marneffei PMAA_043170 I
PMAA_043170 Penicillium marneffei PMAA_043170 I
PODANS_1_11860 Podospora anserina PODANS_1_11860 I
PTT_17167 Pyrenophora teres PTT_17167 I
PV04_06397 Capronia semiimmersa PV04_06397 I
PV05_08455 Exophiala xenobiotica PV05_08455 I
PV06_02480 Exophiala oligosperma PV06_02480 I
PV07_03516 Cladophialophora immunda PV07_03516 I
PV08_02622 Exophiala spinifera PV08_02622 I
PV09_02511 Verruconis gallopava PV09_02511 I
PV10_08190 Exophiala mesophila PV10_08190 I
PV11_07448 Exophiala sideris PV11_07448 I
PVAR5_3751 Byssochlamys spectabilis PVAR5_3751 I
S40285_00857 Stachybotrys chlorohalonata S40285_00857 I
S40288_03500 Stachybotrys chartarum S40288_03500 I
SAPIO_CDS3083 Scedosporium apiospermum SAPIO_CDS3083 I
SBOR_4877 Sclerotinia borealis SBOR_4877 I
SEPMUDRAFT_129980 Sphaerulina musiva SEPMUDRAFT_129980 I
SETTUDRAFT_156846 Setosphaeria turcica SETTUDRAFT_156846 I
SMAC_02806 Sordaria macrospora SMAC_02806 I
SNOG_06810 Stagonospora nodorum SNOG_06810 I
SNOG_06810 Phaeosphaeria nodorum SNOG_06810 I
SPBR_04826 Sporothrix brasiliensis SPBR_04826 I
SS1G_01557 Sclerotinia sclerotiorum SS1G_01557 I
TEQG_07596 Trichophyton equinum TEQG_07596 I
THITE_2143564 Thielavia terrestris THITE_2143564 I
TRIATDRAFT_198898 Trichoderma atroviride TRIATDRAFT_198898 I
TRIREDRAFT_112532 Trichoderma reesei TRIREDRAFT_112532 I
TRIVIDRAFT_142610 Trichoderma virens TRIVIDRAFT_142610 I
TRV_02590 Trichophyton verrucosum TRV_02590 I
TSTA_076950 Talaromyces stipitatus TSTA_076950 I
U727_00434280111 Penicillium solitum U727_00434280111 I
UCREL1_11189 Eutypa lata UCREL1_11189 I
UREG_05851 Uncinocarpus reesii UREG_05851 I
UV8b_5026 Ustilaginoidea virens UV8b_5026 I
V499_06127 Pseudogymnoascus pannorum V499_06127 I
VDAG_03217 Verticillium dahliae VDAG_03217 I
VHEMI06472 Torrubiella hemipterigena VHEMI06472 I
W97_00561 Coniosporium apollinis W97_00561 I
X797_003719 Metarhizium robertsii X797_003719 I
Z517_01173 Fonsecaea pedrosoi Z517_01173 I
Z518_05389 Rhinocladiella mackenziei Z518_05389 I
Z519_03752 Cladophialophora bantiana Z519_03752 I