CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

NV11000 *(Nasonia vitripennis)* Runt
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00853 (Runt)	IPR013524	NV11000	T319604_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
lz M03964_2.00	Drosophila melanogaster	HRACCGCAAHM	KDTTGCGGTYD	SELEX Nitta et al.(2015) lz_1	0.823	0.823
lz M03965_2.00	Drosophila melanogaster	HVACCRCARWAACCRCAV	BTGYGGTTWYTGYGGTBD	SELEX Nitta et al.(2015) lz_2	0.823	0.823
lz M03966_2.00	Drosophila melanogaster	WRACCRCAWTAACCRCAA	TTGYGGTTAWTGYGGTYW	SELEX Nitta et al.(2015) lz_3	0.823	0.823
lz M03967_2.00	Drosophila melanogaster	HRACCGCAAAACCRCAR	YTGYGGTTTTGCGGTYD	SELEX Nitta et al.(2015) lz_4	0.823	0.823
Runx2 M01307_2.00	Mus musculus	NHDACCRCAN	NTGYGGTHDN	PBM Lambert et al.(2019) pTH9764	0.769	0.769
RUNX2 M03468_2.00	Homo sapiens	HRACCGCAAACCRCRD	HYGYGGTTTGCGGTYD	SELEX Jolma et al.(2013) RUNX2_1	0.769	0.769
RUNX2 M03469_2.00	Homo sapiens	HRACCRCADWWACCRCAD	HTGYGGTWWHTGYGGTYD	SELEX Jolma et al.(2013) RUNX2_2	0.769	0.769
RUNX2 M03470_2.00	Homo sapiens	WAACCRCAR	YTGYGGTTW	SELEX Jolma et al.(2013) RUNX2_3	0.769	0.769
RUNX2 M05733_2.00	Homo sapiens	NHRACCRCADWAACCRCAVN	NBTGYGGTTWHTGYGGTYDN	SELEX Yin et al.(2017) RUNX2_eDBD_HT-SELEX	0.769	0.769
RUNX2 M09370_2.00	Homo sapiens	MMHAACCACAVVMH	DKBBTGTGGTTDKK	Misc Kulakovskiy et al.(2013) RUNX2_HUMAN.H11MO.0.A	0.769	0.769
Runx2 M09373_2.00	Mus musculus	VWRACCACARVV	BBYTGTGGTYWB	Misc Kulakovskiy et al.(2013) RUNX2_MOUSE.H11MO.0.A	0.769	0.769
RUNX2 M09630_2.00	Homo sapiens	NHVACCACANNN	NNNTGTGGTBDN	Misc Heinz et al.(2010) PCa-RUNX2_GSE33889	0.769	0.769
RUNX2 M11255_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML3_Q3	0.769	0.769
RUNX2 M11256_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML3_Q6	0.769	0.769
RUNX2 M11257_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$OSF2_Q6	0.769	0.769
RUNX2 M05734_2.00	Homo sapiens	NWAACCACRAAAACCACRRN	NYYGTGGTTTTYGTGGTTWN	SELEX Yin et al.(2017) RUNX2_eDBD_Methyl-HT-SELEX	0.769	0.769
RUNX3 M03464_2.00	Homo sapiens	HRACCGCAAACCRCAN	NTGYGGTTTGCGGTYD	SELEX Jolma et al.(2013) RUNX3_1	0.762	0.762
RUNX3 M03465_2.00	Homo sapiens	WAACCRCARN	NYTGYGGTTW	SELEX Jolma et al.(2013) RUNX3_2	0.762	0.762
RUNX3 M03466_2.00	Homo sapiens	HDACCRCADWAACCRCRN	NYGYGGTTWHTGYGGTHD	SELEX Jolma et al.(2013) RUNX3_3	0.762	0.762
RUNX3 M03467_2.00	Homo sapiens	HRACCRCAAH	DTTGYGGTYD	SELEX Jolma et al.(2013) RUNX3_4	0.762	0.762
RUNX3 M02751_2.00	Homo sapiens	WACCRCAM	KTGYGGTW	SELEX Jolma et al.(2010) RUNX3_monomer	0.762	0.762
RUNX3 M05731_2.00	Homo sapiens	YWAACCGCAAAAACCGCARV	BYTGCGGTTTTTGCGGTTWR	SELEX Yin et al.(2017) RUNX3_FL_HT-SELEX	0.762	0.762
RUNX3 M09369_2.00	Homo sapiens	HAACCACARN	NYTGTGGTTD	Misc Kulakovskiy et al.(2013) RUNX3_HUMAN.H11MO.0.A	0.762	0.762
Runx3 M09374_2.00	Mus musculus	NHRACCACARVN	NBYTGTGGTYDN	Misc Kulakovskiy et al.(2013) RUNX3_MOUSE.H11MO.0.A	0.762	0.762
RUNX3 M11252_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML2_Q3_01	0.762	0.762
RUNX3 M11253_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML2_Q3	0.762	0.762
RUNX3 M11254_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML2_Q4	0.762	0.762
RUNX3 M05732_2.00	Homo sapiens	HWAACCACRAAAACCACRARN	NYTYGTGGTTTTYGTGGTTWD	SELEX Yin et al.(2017) RUNX3_FL_Methyl-HT-SELEX	0.762	0.762
Runx1 M08163_2.00	Mus musculus	HRRCCACARVN	NBYTGTGGYYD	ChIP-seq Mathelier et al.(2014) MA0002.2	0.754	0.754
RUNX1 M09371_2.00	Homo sapiens	NWAACCACARV	BYTGTGGTTWN	Misc Kulakovskiy et al.(2013) RUNX1_HUMAN.H11MO.0.A	0.754	0.754
Runx1 M09372_2.00	Mus musculus	VWRACCACARVV	BBYTGTGGTYWB	Misc Kulakovskiy et al.(2013) RUNX1_MOUSE.H11MO.0.A	0.754	0.754
RUNX1 M09632_2.00	Homo sapiens	HAACCACADV	BHTGTGGTTD	Misc Heinz et al.(2010) Jurkat-RUNX1_GSE29180	0.754	0.754
RUNX1 M09631_2.00	Homo sapiens	VCCACWTCCTBY	RVAGGAWGTGGB	Misc Heinz et al.(2010) Jurkat-RUNX1_GSE17954	0.754	0.754
Runx1 M09633_2.00	Mus musculus	NWAACCACAR	YTGTGGTTWN	Misc Heinz et al.(2010) HPC7-Runx1_GSE22178	0.754	0.754
RUNX1 M11258_2.00	Homo sapiens	ACCRCA	TGYGGT	Transfac Matys et al.(2006) V$AML1_01	0.754	0.754
RUNX1 M11259_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML1_Q4_01	0.754	0.754
RUNX1 M11260_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML1_Q4_02	0.754	0.754
RUNX1 M11261_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML1_Q4	0.754	0.754
RUNX1 M11262_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML1_Q5	0.754	0.754
RUNX1 M11263_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$AML1_Q6	0.754	0.754
run M06444_2.00	Drosophila melanogaster	WAACCGCAR	YTGCGGTTW	B1H Zhu et al.(2011) run_Bgb_NBT_FBgn0003300	0.700	0.700
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
NV11000-PA	Runt	115	244	LGDYMSEHPGELVRTGSPHLVCTVLPAHWRSNKTLPVAFKVVALGEVGDGTVVTVRAGNDENCCAELRNSTALMKNQVAKFNDLRFVGRSGRGKSFTLTITVSTTPPQVATYAKAIKVTVDGPREPRSKT

Links
Other Runt family TFs
Other *Nasonia vitripennis* TFs

357 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ACRE_075020	Acremonium chrysogenum	ACRE_075020	N	0.000
CFIO01_13578	Colletotrichum fioriniae	CFIO01_13578	N	0.000
Cob_10044	Colletotrichum orbiculare	Cob_10044	N	0.000
CPUR_04956	Claviceps purpurea	CPUR_04956	N	0.000
CSUB01_05031	Colletotrichum sublineola	CSUB01_05031	N	0.000
CTHT_0022700	Chaetomium thermophilum	CTHT_0022700	N	0.000
estExt_fgenesh1_pg.C_10747	Cryphonectria parasitica	estExt_fgenesh1_pg.C_10747	N	0.000
estExt_Genewise1Plus.C_sca_10_chr8_2_00572	Nectria haematococca	estExt_Genewise1Plus.C_sca_10_chr8_2_00572	N	0.000
F503_04396	Ophiostoma piceae uamh	F503_04396	N	0.000
FFUJ_08604	Fusarium fujikuroi	FFUJ_08604	N	0.000
FGRRES_12742	Fusarium graminearum	FGRRES_12742	N	0.000
FOXG_09425	Fusarium oxysporum	FOXG_09425	N	0.000
FPSE_03532	Fusarium pseudograminearum	FPSE_03532	N	0.000
FVEG_07057	Fusarium verticillioides	FVEG_07057	N	0.000
GGTG_09471	Gaeumannomyces graminis	GGTG_09471	N	0.000
GLRG_00168	Colletotrichum graminicola	GLRG_00168	N	0.000
HMPREF1624_03120	Sporothrix schenckii	HMPREF1624_03120	N	0.000
MAJ_03545	Metarhizium majus	MAJ_03545	N	0.000
MANI_026245	Metarhizium anisopliae	MANI_026245	N	0.000
MAPG_03301	Magnaporthe poae	MAPG_03301	N	0.000
MBR_07611	Metarhizium brunneum	MBR_07611	N	0.000
MGU_03902	Metarhizium guizhouense	MGU_03902	N	0.000
NCU16667	Neurospora crassa	NCU16667	N	0.000
NechaG71135	Fusarium solani	NechaG71135	N	0.000
PFICI_06916	Pestalotiopsis fici	PFICI_06916	N	0.000
PODANS_7_2610	Podospora anserina	PODANS_7_2610	N	0.000
S40285_00214	Stachybotrys chlorohalonata	S40285_00214	N	0.000
S40288_02231	Stachybotrys chartarum	S40288_02231	N	0.000
SPBR_01267	Sporothrix brasiliensis	SPBR_01267	N	0.000
THITE_2155541	Thielavia terrestris	THITE_2155541	N	0.000
TRIATDRAFT_52152	Trichoderma atroviride	TRIATDRAFT_52152	N	0.000
UV8b_1336	Ustilaginoidea virens	UV8b_1336	N	0.000
VDAG_05861	Verticillium dahliae	VDAG_05861	N	0.000
VDBG_06797	Verticillium alfalfae	VDBG_06797	N	0.000
VDBG_06797	Verticillium albo atrum	VDBG_06797	N	0.000
VHEMI09995	Torrubiella hemipterigena	VHEMI09995	N	0.000
X797_003277	Metarhizium robertsii	X797_003277	N	0.000

NV11000 (Nasonia vitripennis) Runt

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

357 Related TFs

NV11000 **(Nasonia vitripennis)
Runt**