LDEC020505 (Leptinotarsa decemlineata)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 LDEC020505 T319698_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.730 0.730
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.730 0.730
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.730 0.730
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.730 0.730
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.730 0.730
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.730 0.730
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.730 0.730
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.730 0.730
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.730 0.730
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.730 0.730
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.730 0.730
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.730 0.730
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.720 0.720
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.720 0.720
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.720 0.720
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.720 0.720
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.720 0.720
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.720 0.720
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.720 0.720
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.720 0.720
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.720 0.720
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.720 0.720
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.720 0.720
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.720 0.720
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.710 0.710
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.710 0.710
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.710 0.710
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.710 0.710
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.710 0.710
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.710 0.710
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.710 0.710
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.710 0.710
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.710 0.710
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.710 0.710
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.710 0.710
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.710 0.710
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC020505-PA Runt 31 130

Links

Other Runt family TFs
Other Leptinotarsa decemlineata TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010905 Ailuropoda melanoleuca ENSAMEG00000010905 N 0.000
ENSAMXG00000001564 Astyanax mexicanus ENSAMXG00000001564 N 0.000
ZNF703 Bos taurus ENSBTAG00000013943 N 0.000
ZNF703 Canis familiaris ENSCAFG00000006224 N 0.000
ZNF703 Callithrix jacchus ENSCJAG00000002785 N 0.000
ENSCSAG00000015685 Chlorocebus sabaeus ENSCSAG00000015685 N 0.000
ZNF703 Dasypus novemcinctus ENSDNOG00000034526 N 0.000
ENSDORG00000012028 Dipodomys ordii ENSDORG00000012028 N 0.000
ZNF703 Echinops telfairi ENSETEG00000016392 N 0.000
ZNF703 Homo sapiens ENSG00000183779 N 0.000
ZNF703 Gorilla gorilla ENSGGOG00000011795 N 0.000
ZNF703 Loxodonta africana ENSLAFG00000032676 N 0.000
ENSMEUG00000008055 Macropus eugenii ENSMEUG00000008055 N 0.000
ZNF703 Myotis lucifugus ENSMLUG00000011770 N 0.000
ZNF703 Macaca mulatta ENSMMUG00000001635 N 0.000
ZNF703 Monodelphis domestica ENSMODG00000010894 N 0.000
ENSMPUG00000010048 Mustela putorius furo ENSMPUG00000010048 N 0.000
Zfp703 Mus musculus ENSMUSG00000085795 N 0.000
ZNF703 Otolemur garnettii ENSOGAG00000029076 N 0.000
ENSONIG00000016178 Oreochromis niloticus ENSONIG00000016178 N 0.000
ENSORLG00000008664 Oryzias latipes ENSORLG00000008664 N 0.000
ENSPANG00000009528 Papio anubis ENSPANG00000009528 N 0.000
ZNF703 Procavia capensis ENSPCAG00000012052 N 0.000
ENSPFOG00000008404 Poecilia formosa ENSPFOG00000008404 N 0.000
ENSPPYG00000018508 Pongo abelii ENSPPYG00000018508 N 0.000
ZNF703 Pan troglodytes ENSPTRG00000020156 N 0.000
Zfp703 Rattus norvegicus ENSRNOG00000014199 N 0.000
ZNF703 Sus scrofa ENSSSCG00000015828 N 0.000
ENSSTOG00000005512 Ictidomys tridecemlineatus ENSSTOG00000005512 N 0.000
ENSTRUG00000014235 Takifugu rubripes ENSTRUG00000014235 N 0.000
ENSXMAG00000015479 Xiphophorus maculatus ENSXMAG00000015479 N 0.000