ACUA016618 (Anopheles culicifacies)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 ACUA016618 T319736_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.838 0.838
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.708 0.708
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.708 0.708
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.708 0.708
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.708 0.708
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.708 0.708
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.708 0.708
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.708 0.708
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.708 0.708
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.708 0.708
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.708 0.708
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.708 0.708
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.708 0.708
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.708 0.708
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.708 0.708
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.708 0.708
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACUA016618-PA Runt 27 156

Links

Other Runt family TFs
Other Anopheles culicifacies TFs

231 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
anac095 Arabidopsis lyrata Al_scaffold_0007_3541 N 0.000
AT3G56520 Arabidopsis thaliana AT3G56520 N 0.000
Bo6g064960 Brassica oleracea Bo6g064960 N 0.000
Bo6g072200 Brassica oleracea Bo6g072200 N 0.000
Bo8g090950 Brassica oleracea Bo8g090950 N 0.000
Bostr.20505s0102 Boechera stricta Bostr.20505s0102 N 0.000
Bostr.7200s0128 Boechera stricta Bostr.7200s0128 N 0.000
Bra003244 Brassica rapa Bra003244 N 0.000
Bra007254 Brassica rapa Bra007254 N 0.000
Bra028486 Brassica rapa Bra028486 N 0.000
Cagra.1914s0015 Capsella grandiflora Cagra.1914s0015 N 0.000
Carubv10005574m.g Capsella rubella Carubv10005574m.g N 0.000
Ca_22941 Cicer arietinum Ca_22941 N 0.000
fgenesh1_pm.C_scaffold_5001708 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001708 N 0.000
GRMZM2G179049 Zea mays GRMZM2G179049 N 0.000
LPERR08G18520 Leersia perrieri LPERR08G18520 N 0.000
mgf006124m Mimulus guttatus mgf006124m N 0.000
MLOC_55957 Hordeum vulgare MLOC_55957 N 0.000
OMERI06G13840 Oryza meridionalis OMERI06G13840 N 0.000
scaffold_500654.1 Arabidopsis lyrata scaffold_500654.1 N 0.000
Thhalv10006451m.g Eutrema salsugineum Thhalv10006451m.g N 0.000
Thhalv10027901m.g Eutrema salsugineum Thhalv10027901m.g N 0.000