CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PPAI006591
(
Phlebotomus papatasi
)
Runt
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00853 (Runt)
IPR013524
PPAI006591
T319781_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
lz
M03964_2.00
Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_1
0.833
0.833
lz
M03965_2.00
Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD
SELEX
Nitta et al.(2015)
lz_2
0.833
0.833
lz
M03966_2.00
Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW
SELEX
Nitta et al.(2015)
lz_3
0.833
0.833
lz
M03967_2.00
Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD
SELEX
Nitta et al.(2015)
lz_4
0.833
0.833
run
M06444_2.00
Drosophila melanogaster
WAACCGCAR
YTGCGGTTW
B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300
0.833
0.833
Runx2
M01307_2.00
Mus musculus
NHDACCRCAN
NTGYGGTHDN
PBM
Lambert et al.(2019)
pTH9764
0.708
0.708
RUNX2
M03468_2.00
Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX2_1
0.708
0.708
RUNX2
M03469_2.00
Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX2_2
0.708
0.708
RUNX2
M03470_2.00
Homo sapiens
WAACCRCAR
YTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX2_3
0.708
0.708
RUNX3
M03464_2.00
Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD
SELEX
Jolma et al.(2013)
RUNX3_1
0.708
0.708
RUNX3
M03465_2.00
Homo sapiens
WAACCRCARN
NYTGYGGTTW
SELEX
Jolma et al.(2013)
RUNX3_2
0.708
0.708
RUNX3
M03466_2.00
Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD
SELEX
Jolma et al.(2013)
RUNX3_3
0.708
0.708
RUNX3
M03467_2.00
Homo sapiens
HRACCRCAAH
DTTGYGGTYD
SELEX
Jolma et al.(2013)
RUNX3_4
0.708
0.708
RUNX3
M02751_2.00
Homo sapiens
WACCRCAM
KTGYGGTW
SELEX
Jolma et al.(2010)
RUNX3_monomer
0.708
0.708
RUNX2
M05733_2.00
Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN
SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX
0.708
0.708
RUNX3
M05731_2.00
Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR
SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX
0.708
0.708
RUNX2
M09370_2.00
Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK
Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A
0.708
0.708
RUNX3
M09369_2.00
Homo sapiens
HAACCACARN
NYTGTGGTTD
Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A
0.708
0.708
Runx2
M09373_2.00
Mus musculus
VWRACCACARVV
BBYTGTGGTYWB
Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A
0.708
0.708
Runx3
M09374_2.00
Mus musculus
NHRACCACARVN
NBYTGTGGTYDN
Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A
0.708
0.708
RUNX2
M09630_2.00
Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN
Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889
0.708
0.708
RUNX3
M11252_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3_01
0.708
0.708
RUNX3
M11253_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q3
0.708
0.708
RUNX3
M11254_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML2_Q4
0.708
0.708
RUNX2
M11255_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q3
0.708
0.708
RUNX2
M11256_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AML3_Q6
0.708
0.708
RUNX2
M11257_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OSF2_Q6
0.708
0.708
RUNX2
M05734_2.00
Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN
SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX
0.708
0.708
RUNX3
M05732_2.00
Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD
SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX
0.708
0.708
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPAI006591-PA
Runt
1
24
MQIATYTKAIKVTVDGPREPRSKV
Links
Other
Runt
family TFs
Other
Phlebotomus papatasi
TFs
292 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000018175
Ailuropoda melanoleuca
ENSAMEG00000018175
N
0.000
MXD3
Bos taurus
ENSBTAG00000005010
N
0.000
MXD3
Canis familiaris
ENSCAFG00000016437
N
0.000
ENSCJAG00000006943
Callithrix jacchus
ENSCJAG00000006943
N
0.000
ENSCSAG00000008875
Chlorocebus sabaeus
ENSCSAG00000008875
N
0.000
MXD4
Equus caballus
ENSECAG00000002580
N
0.000
MXD3
Equus caballus
ENSECAG00000021155
N
0.000
MXD3
Erinaceus europaeus
ENSEEUG00000015798
N
0.000
MXD3
Echinops telfairi
ENSETEG00000010972
N
0.000
ENSFALG00000000117
Ficedula albicollis
ENSFALG00000000117
N
0.000
MXD3
Felis catus
ENSFCAG00000001533
N
0.000
MXD3
Homo sapiens
ENSG00000213347
N
0.000
ENSGGOG00000011764
Gorilla gorilla
ENSGGOG00000011764
N
0.000
MXD3
Loxodonta africana
ENSLAFG00000021836
N
0.000
ENSMEUG00000013427
Macropus eugenii
ENSMEUG00000013427
N
0.000
ENSMLUG00000007019
Myotis lucifugus
ENSMLUG00000007019
N
0.000
ENSMMUG00000009047
Macaca mulatta
ENSMMUG00000009047
N
0.000
ENSMMUP00000033662
Macaca fascicularis
ENSMMUP00000033662
N
0.000
MXD4
Monodelphis domestica
ENSMODG00000004033
N
0.000
MXD3
Monodelphis domestica
ENSMODG00000004791
N
0.000
ENSMPUG00000012200
Mustela putorius furo
ENSMPUG00000012200
N
0.000
Mxd3
Mus musculus
ENSMUSG00000021485
N
0.000
ENSNLEG00000012726
Nomascus leucogenys
ENSNLEG00000012726
N
0.000
ENSOARG00000004235
Ovis aries
ENSOARG00000004235
N
0.000
MXD4
Oryctolagus cuniculus
ENSOCUG00000005063
N
0.000
MXD3
Oryctolagus cuniculus
ENSOCUG00000022519
N
0.000
MXD3
Otolemur garnettii
ENSOGAG00000032370
N
0.000
MXD3
Ochotona princeps
ENSOPRG00000002125
N
0.000
ENSP00000389716-D1
Bos grunniens
ENSP00000389716-D1
N
0.000
ENSPANG00000007888
Papio anubis
ENSPANG00000007888
N
0.000
MXD3
Pan troglodytes
ENSPTRG00000034491
N
0.000
MXD3
Pteropus vampyrus
ENSPVAG00000003828
N
0.000
Rab24
Rattus norvegicus
ENSRNOG00000016539
N
0.000
ENSSHAG00000011878
Sarcophilus harrisii
ENSSHAG00000011878
N
0.000
ENSSHAG00000013431
Sarcophilus harrisii
ENSSHAG00000013431
N
0.000
MXD3
Sus scrofa
ENSSSCG00000014041
N
0.000
ENSSTOG00000002697
Ictidomys tridecemlineatus
ENSSTOG00000002697
N
0.000
MXD3
Tursiops truncatus
ENSTTRG00000009572
N
0.000
Myotis_brandtii_MXD3_10032506
Myotis brandtii
Myotis_brandtii_MXD3_10032506
N
0.000
mxd3
Xenopus tropicalis
XB-GENE-867571
N
0.000
mxd3.L
Xenopus laevis
XB-GENE-867580
N
0.000