fgenesh2_kg.1__2251__AT1G20640.2 (Arabidopsis lyrata)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 fgenesh2_kg.1__2251__AT1G20640.2 T320040_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		1.000 1.000
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__2251__AT1G20640.2 RWP-RK 557 605

Links

Other RWP-RK family TFs
Other Arabidopsis lyrata TFs

398 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_00943 Arthroderma benhamiae ARB_00943 N
Bcin01g00970 Botrytis cinerea Bcin01g00970 N
BDDG_09520 Blastomyces dermatitidis BDDG_09520 N
ACLA_002350 Aspergillus clavatus CADACLAG00000323 I
CADAFLAG00010617 Aspergillus flavus CADAFLAG00010617 N
AFUA_5G02800 Aspergillus fumigatus CADAFUAG00002739 I
CADANGAG00002494 Aspergillus niger CADANGAG00002494 N
ANIA_08129 Aspergillus nidulans CADANIAG00004163 N
CADAORAG00009780 Aspergillus oryzae CADAORAG00009780 N
ATEG_09249 Aspergillus terreus CADATEAG00003546 N
NFIA_039290 Neosartorya fischeri CADNFIAG00003792 I
EURHEDRAFT_448370 Aspergillus ruber EURHEDRAFT_448370 N
H101_06470 Trichophyton interdigitale H101_06470 N
H102_06324 Trichophyton rubrum H102_06324 N
H105_06363 Trichophyton soudanense H105_06363 N
HCBG_05889 Histoplasma capsulatum HCBG_05889 N
MBM_00253 Marssonina brunnea MBM_00253 I
Pc21g18560 Penicillium chrysogenum Pc21g18560 N
PCH_Pc21g18560 Penicillium rubens PCH_Pc21g18560 N
PDE_09868 Penicillium oxalicum PDE_09868 I
PEX1_080650 Penicillium expansum PEX1_080650 N
PV05_02316 Exophiala xenobiotica PV05_02316 N
PV05_09226 Exophiala xenobiotica PV05_09226 I
PV11_08622 Exophiala sideris PV11_08622 N
PV11_10218 Exophiala sideris PV11_10218 N
SBOR_5571 Sclerotinia borealis SBOR_5571 N
SS1G_13001 Sclerotinia sclerotiorum SS1G_13001 N
TRV_00744 Trichophyton verrucosum TRV_00744 N
VHEMI03668 Torrubiella hemipterigena VHEMI03668 N