MTR_5g099060 (Medicago truncatula)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 MTR_5g099060 T320549_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.918 0.918
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.878 0.878
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AET01067 RWP-RK 616 664

Links

Other RWP-RK family TFs
Other Medicago truncatula TFs

410 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_17280 Ancylostoma caninum ANCCAN_17280 N 0.000
ANCCEY_14351 Ancylostoma ceylanicum ANCCEY_14351 N 0.000
CGOC_0000842301 Cylicostephanus goldi CGOC_0000842301 N 0.000
CGOC_0001416501 Cylicostephanus goldi CGOC_0001416501 N 0.000
HCOI00053600 Haemonchus contortus HCOI00053600 N 0.000
HCOI00054300 Haemonchus contortus HCOI00054300 N 0.000
HPBE_0001687501 Heligmosomoides bakeri HPBE_0001687501 N 0.000
HPLM_0000958201 Haemonchus placei HPLM_0000958201 N 0.000
NBR_0000104901 Nippostrongylus brasiliensis NBR_0000104901 N 0.000
NBR_0000527701 Nippostrongylus brasiliensis NBR_0000527701 N 0.000
SVUK_0000917901 Strongylus vulgaris SVUK_0000917901 N 0.000