OLONG_014948 (Oryza longistaminata)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 OLONG_014948 T320592_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.878 0.878
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.878 0.878
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_014948-R1 RWP-RK 529 577
OLONG_014948-R2 RWP-RK 540 588

Links

Other RWP-RK family TFs
Other Oryza longistaminata TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10011617 Chelonia mydas Cmyd_10011617 N
MXI1 Callithrix jacchus ENSCJAG00000018614 I
MXI1 Homo sapiens ENSG00000119950 D
ENSMLUG00000016004 Myotis lucifugus ENSMLUG00000016004 I
MXI1 Macaca mulatta ENSMMUG00000014350 I
ENSOANG00000003095 Ornithorhynchus anatinus ENSOANG00000003095 N
ENSSHAG00000015280 Sarcophilus harrisii ENSSHAG00000015280 N
MXI1 Sus scrofa ENSSSCG00000022128 N
mxd1 Takifugu rubripes ENSTRUG00000014843 N
fgenesh2_pg.scaffold_205000024 Branchiostoma floridae fgenesh2_pg.scaffold_205000024 N
GB47086 Apis mellifera GB47086 N
HHAL004586-PA Halyomorpha halys HHAL004586-PA N
Hsal_06326--XP_001122605.1_APIME Harpegnathos saltator Hsal_06326--XP_001122605.1_APIME N
PHUM333690 Pediculus humanus PHUM333690 N
SMAR005404 Strigamia maritima SMAR005404 N