OLONG_016325 (Oryza longistaminata)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 OLONG_016325 T320593_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.735 0.735
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.735 0.735
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_016325-R1 RWP-RK 115 163

Links

Other RWP-RK family TFs
Other Oryza longistaminata TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M438DRAFT_281100 Aureobasidium pullulans M438DRAFT_281100 N 0.000
MCYG_04007 Microsporum canis MCYG_04007 N 0.000
PEX1_039490 Penicillium expansum PEX1_039490 N 0.000