OMERI06G09770 (Oryza meridionalis)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 OMERI06G09770 T320603_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.755 0.755
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.755 0.755
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI06G09770.1 RWP-RK 836 884
OMERI06G09770.2 RWP-RK 830 878

Links

Other RWP-RK family TFs
Other Oryza meridionalis TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG008492.1 Alligator sinensis Alligator_sinensis_CCG008492.1 N 0.000
ENSAMXG00000013942 Astyanax mexicanus ENSAMXG00000013942 N 0.000
ENSAMXG00000015160 Astyanax mexicanus ENSAMXG00000015160 N 0.000
ENSDORG00000008881 Dipodomys ordii ENSDORG00000008881 N 0.000
ENSFCAG00000024757 Felis catus ENSFCAG00000024757 N 0.000
ahrrb Gasterosteus aculeatus ENSGACG00000001925 N 0.000
ENSGACG00000008458 Gasterosteus aculeatus ENSGACG00000008458 N 0.000
ENSGMOG00000004692 Gadus morhua ENSGMOG00000004692 N 0.000
ENSGMOG00000009114 Gadus morhua ENSGMOG00000009114 N 0.000
ENSLAFG00000030495 Loxodonta africana ENSLAFG00000030495 N 0.000
ENSMMUG00000030507 Macaca mulatta ENSMMUG00000030507 N 0.000
ENSMMUP00000035736 Macaca fascicularis ENSMMUP00000035736 N 0.000
ENSMODG00000028175 Monodelphis domestica ENSMODG00000028175 N 0.000
ENSONIG00000012216 Oreochromis niloticus ENSONIG00000012216 N 0.000
ENSONIG00000017966 Oreochromis niloticus ENSONIG00000017966 N 0.000
ahrrb Oryzias latipes ENSORLG00000005309 N 0.000
ENSPFOG00000008038 Poecilia formosa ENSPFOG00000008038 N 0.000
ENSPFOG00000012230 Poecilia formosa ENSPFOG00000012230 N 0.000
ENSPFOG00000018959 Poecilia formosa ENSPFOG00000018959 N 0.000
AHRR Pteropus vampyrus ENSPVAG00000007881 N 0.000
ENSSHAG00000010002 Sarcophilus harrisii ENSSHAG00000010002 N 0.000
ahrrb Tetraodon nigroviridis ENSTNIG00000008751 N 0.000
ENSTNIG00000015651 Tetraodon nigroviridis ENSTNIG00000015651 N 0.000
ahr2 Tetraodon nigroviridis ENSTNIG00000015652 N 0.000
ahrr Takifugu rubripes ENSTRUG00000003745 N 0.000
ahr1a Takifugu rubripes ENSTRUG00000008980 N 0.000
ENSXMAG00000005059 Xiphophorus maculatus ENSXMAG00000005059 N 0.000
Sakowv30000409m.g Saccoglossus kowalevskii Sakowv30000409m.g N 0.000