Si000216m.g (Setaria italica)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Si000216m.g T320813_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.918 0.918
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si000216m RWP-RK 591 639

Links

Other RWP-RK family TFs
Other Setaria italica TFs

415 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA008594 Oryza indica BGIOSGA008594 N 0.000
BRADI3G48310 Brachypodium distachyon BRADI3G48310 N 0.000
GRMZM2G117108 Zea mays GRMZM2G117108 N 0.000
MLOC_80133 Hordeum vulgare MLOC_80133 N 0.000
OB0054G10020 Oryza brachyantha OB0054G10020 N 0.000
OS02G0608100 Oryza sativa OS02G0608100 N 0.000
Pavir.Ab02304 Panicum virgatum Pavir.Ab02304 N 0.000
Pavir.J27368 Panicum virgatum Pavir.J27368 N 0.000
Sb04g025520 Sorghum bicolor Sb04g025520 N 0.000
Si013246m.g Setaria italica Si013246m.g N 0.000
Traes_4BL_208AF4C7D Triticum aestivum Traes_4BL_208AF4C7D N 0.000
Traes_4DL_A9DA4DCF1 Triticum aestivum Traes_4DL_A9DA4DCF1 N 0.000
TRIUR3_03147 Triticum urartu TRIUR3_03147 N 0.000