Solyc04g082480.2 (Solanum lycopersicum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 Solyc04g082480.2 T320836_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.918 0.918
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.878 0.878
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc04g082480.2.1 RWP-RK 591 639

Links

Other RWP-RK family TFs
Other Solanum lycopersicum TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cmyd_10009563 Chelonia mydas Cmyd_10009563 N
C_01193 Schistosoma haematobium C_01193 N
D915_08122 Fasciola hepatica D915_08122 N
MCOS_0000566101 Mesocestoides corti MCOS_0000566101 N
Sjc_0025520 Schistosoma japonicum Sjc_0025520 N
Smp_015670 Schistosoma mansoni Smp_015670 N
SMRZ_0001688001 Schistosoma margrebowiei SMRZ_0001688001 N
SMTD_0000782201 Schistosoma mattheei SMTD_0000782201 N
SMU15000156 Schmidtea mediterranea SMU15000156 N
SROB_0000888801 Schistosoma rodhaini SROB_0000888801 N
T265_00242 Opisthorchis viverrini T265_00242 N
TRE_0001588001 Trichobilharzia regenti TRE_0001588001 N