VIT_05s0094g00020 (Vitis vinifera)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 VIT_05s0094g00020 T320894_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.837 0.837
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_05s0094g00020.t01 RWP-RK 626 674

Links

Other RWP-RK family TFs
Other Vitis vinifera TFs

415 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALUE_0000619901 Ascaris lumbricoides ALUE_0000619901 N
ANCCAN_05450 Ancylostoma caninum ANCCAN_05450 N
ANCDUO_15741 Ancylostoma duodenale ANCDUO_15741 N
ASU_13766 Ascaris suum ASU_13766 N
Bm4333 Brugia malayi Bm4333 N
BTMF_0000486301 Brugia timori BTMF_0000486301 N
BXY_0672000 Bursaphelenchus xylophilus BXY_0672000 N
CBG22107 Caenorhabditis briggsae CBG22107 N
CBN30232 Caenorhabditis brenneri CBN30232 N
CBN30270 Caenorhabditis brenneri CBN30270 N
CJA08191 Caenorhabditis japonica CJA08191 N
CRE03949 Caenorhabditis remanei CRE03949 N
DICVIV_09346 Dictyocaulus viviparus DICVIV_09346 N
DME_0000931601 Dracunculus medinensis DME_0000931601 N
EEL_0000684201 Elaeophora elaphi EEL_0000684201 N
EVEC_0001364401 Enterobius vermicularis EVEC_0001364401 N
GPLIN_000440300 Globodera pallida GPLIN_000440300 N
GPUH_0001663001 Gongylonema pulchrum GPUH_0001663001 N
Hba_11200 Heterorhabditis bacteriophora Hba_11200 N
HPBE_0002612401 Heligmosomoides bakeri HPBE_0002612401 N
L596_g19795 Steinernema carpocapsae L596_g19795 N
L889_g2315 Steinernema feltiae L889_g2315 N
L892_g26146 Steinernema scapterisci L892_g26146 N
L893_g25152 Steinernema glaseri L893_g25152 N
L898_g34435 Steinernema monticolum L898_g34435 N
LOAG_08456 Loa loa LOAG_08456 N
maker-nMf.1.1.scaf23008-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf23008-snap-gene-0.4 N
MhA1_Contig3017.frz3.gene1 Meloidogyne hapla MhA1_Contig3017.frz3.gene1 N
nAv.1.0.1.g02967 Acanthocheilonema viteae nAv.1.0.1.g02967 N
NBR_0000074101 Nippostrongylus brasiliensis NBR_0000074101 N
nDi.2.2.2.g01958 Dirofilaria immitis nDi.2.2.2.g01958 N
nLs.2.1.2.g00565 Litomosoides sigmodontis nLs.2.1.2.g00565 N
nOo.2.0.1.g03319 Onchocerca ochengi nOo.2.0.1.g03319 N
OESDEN_08787 Oesophagostomum dentatum OESDEN_08787 N
OESDEN_21968 Oesophagostomum dentatum OESDEN_21968 N
OFLC_0001268901 Onchocerca flexuosa OFLC_0001268901 N
Ppa-hmbx-1 Pristionchus pacificus PPA23312 N
PTRK_0001365600 Parastrongyloides trichosuri PTRK_0001365600 N
RSKR_0001024700 Rhabditophanes kr3021 RSKR_0001024700 N
SMUV_0000066701 Syphacia muris SMUV_0000066701 N
SSTP_0000566900 Strongyloides stercoralis SSTP_0000566900 N
SVE_0169500 Strongyloides venezuelensis SVE_0169500 N
SVUK_0000275901 Strongylus vulgaris SVUK_0000275901 N
TCLT_0000269001 Thelazia callipaeda TCLT_0000269001 N
TCNE_0000831801 Toxocara canis TCNE_0000831801 N
TELCIR_08200 Teladorsagia circumcincta TELCIR_08200 N
hmbx-1 Caenorhabditis elegans WBGene00018786 N
WBGene00237307 Onchocerca volvulus WBGene00237307 N
WUBG_01272 Wuchereria bancrofti WUBG_01272 N