Ca_04456 (Cicer arietinum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Ca_04456 T320906_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.898 0.898
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_04456 RWP-RK 577 625

Links

Other RWP-RK family TFs
Other Cicer arietinum TFs

413 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
COCC4DRAFT_148181 Bipolaris maydis COCC4DRAFT_148181 N 0.000
COCCADRAFT_91226 Bipolaris zeicola COCCADRAFT_91226 N 0.000
COCMIDRAFT_93104 Bipolaris oryzae COCMIDRAFT_93104 N 0.000
COCSADRAFT_33739 Bipolaris sorokiniana COCSADRAFT_33739 N 0.000
COCVIDRAFT_40633 Bipolaris victoriae COCVIDRAFT_40633 N 0.000
FVEG_12449 Fusarium verticillioides FVEG_12449 N 0.000
Moror_10088 Moniliophthora roreri Moror_10088 N 0.000
PTRG_03263 Pyrenophora triticirepentis PTRG_03263 N 0.000
PTT_18442 Pyrenophora teres PTT_18442 N 0.000
PV08_10196 Exophiala spinifera PV08_10196 N 0.000
SETTUDRAFT_167635 Setosphaeria turcica SETTUDRAFT_167635 N 0.000