Ca_13679 (Cicer arietinum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Ca_13679 T320912_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.837 0.837
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_13679 RWP-RK 571 619

Links

Other RWP-RK family TFs
Other Cicer arietinum TFs

415 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG01244 Caenorhabditis briggsae CBG01244 N 0.000
CBG01248 Caenorhabditis briggsae CBG01248 I 0.000
CJA16882 Caenorhabditis japonica CJA16882 I 0.000
CRE02541 Caenorhabditis remanei CRE02541 I 0.000
CRE08760 Caenorhabditis remanei CRE08760 I 0.000
nhr-56 Caenorhabditis elegans WBGene00003646 N 0.000
WBGene00003673 Caenorhabditis elegans WBGene00003673 I 0.000
nhr-184 Caenorhabditis elegans WBGene00018415 I 0.000