Cucsa.114750 (Cucumis sativus)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Cucsa.114750 T320956_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.918 0.918
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.114750.1 RWP-RK 602 650
Cucsa.114750.2 RWP-RK 602 650
Cucsa.114750.3 RWP-RK 592 640
Cucsa.114750.4 RWP-RK 532 580
Cucsa.114750.5 RWP-RK 458 506

Links

Other RWP-RK family TFs
Other Cucumis sativus TFs

415 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSDNOG00000042007 Dasypus novemcinctus ENSDNOG00000042007 N 0.000