Bostr.7867s0209 (Boechera stricta)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Bostr.7867s0209 T321069_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		1.000 1.000
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.7867s0209.1.p RWP-RK 591 639
Bostr.7867s0209.2.p RWP-RK 311 359

Links

Other RWP-RK family TFs
Other Boechera stricta TFs

417 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_003_00875 Aquilegia coerulea Aquca_003_00875 N 0.000
BGIOSGA025747 Oryza indica BGIOSGA025747 N 0.000
BGIOSGA031062 Oryza indica BGIOSGA031062 N 0.000
BGIOSGA037778 Oryza indica BGIOSGA037778 N 0.000
BRADI3G41470 Brachypodium distachyon BRADI3G41470 N 0.000
BRADI4G34800 Brachypodium distachyon BRADI4G34800 N 0.000
Ca_22941 Cicer arietinum Ca_22941 N 0.000
GRMZM2G054277 Zea mays GRMZM2G054277 N 0.000
GRMZM2G100583 Zea mays GRMZM2G100583 N 0.000
GRMZM2G179049 Zea mays GRMZM2G179049 N 0.000
LPERR09G12100 Leersia perrieri LPERR09G12100 N 0.000
LPERR12G15510 Leersia perrieri LPERR12G15510 N 0.000
MLOC_55957 Hordeum vulgare MLOC_55957 N 0.000
OB09G22520 Oryza brachyantha OB09G22520 N 0.000
OB12G25170 Oryza brachyantha OB12G25170 N 0.000
OBART09G15890 Oryza barthii OBART09G15890 N 0.000
OBART12G18490 Oryza barthii OBART12G18490 N 0.000
OGLUM07G14740 Oryza glumaepatula OGLUM07G14740 N 0.000
OGLUM09G16460 Oryza glumaepatula OGLUM09G16460 N 0.000
OGLUM12G20140 Oryza glumaepatula OGLUM12G20140 N 0.000
OMERI07G09680 Oryza meridionalis OMERI07G09680 N 0.000
OMERI09G11810 Oryza meridionalis OMERI09G11810 N 0.000
OMERI12G13180 Oryza meridionalis OMERI12G13180 N 0.000
ONIVA07G09980 Oryza nivara ONIVA07G09980 N 0.000
ONIVA07G13650 Oryza nivara ONIVA07G13650 N 0.000
ONIVA09G17010 Oryza nivara ONIVA09G17010 N 0.000
ONIVA12G17390 Oryza nivara ONIVA12G17390 N 0.000
OPUNC09G14320 Oryza punctata OPUNC09G14320 N 0.000
OPUNC12G16690 Oryza punctata OPUNC12G16690 N 0.000
ORGLA07G0123600 Oryza glaberrima ORGLA07G0123600 N 0.000
ORGLA09G0123200 Oryza glaberrima ORGLA09G0123200 N 0.000
ORGLA12G0157500 Oryza glaberrima ORGLA12G0157500 N 0.000
ORUFI07G15560 Oryza rufipogon ORUFI07G15560 N 0.000
ORUFI09G17170 Oryza rufipogon ORUFI09G17170 N 0.000
ORUFI12G20640 Oryza rufipogon ORUFI12G20640 N 0.000
OS09G0509100 Oryza sativa OS09G0509100 N 0.000
OS12G0610600 Oryza sativa OS12G0610600 N 0.000
Pavir.J04931 Panicum virgatum Pavir.J04931 N 0.000
Pavir.J11699 Panicum virgatum Pavir.J11699 N 0.000
Pavir.J23083 Panicum virgatum Pavir.J23083 N 0.000
Si014408m.g Setaria italica Si014408m.g N 0.000
Si022747m.g Setaria italica Si022747m.g N 0.000
Si030942m.g Setaria italica Si030942m.g N 0.000
Solyc07g066330.2 Solanum lycopersicum Solyc07g066330.2 N 0.000
Traes_5BL_456C3408A Triticum aestivum Traes_5BL_456C3408A N 0.000
Traes_5DL_36AE1EF2B Triticum aestivum Traes_5DL_36AE1EF2B N 0.000