Lus10014428.g (Linum usitatissimum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Lus10014428.g T321173_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.878 0.878
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.878 0.878
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10014428 RWP-RK 531 579

Links

Other RWP-RK family TFs
Other Linum usitatissimum TFs

418 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_01720 Beauveria bassiana BBA_01720 I 0.000
CCM_04145 Cordyceps militaris CCM_04145 I 0.000
CTHT_0034490 Chaetomium thermophilum CTHT_0034490 I 0.000
estExt_Genewise1.C_31450 Neurospora discreta estExt_Genewise1.C_31450 I 0.000
e_gw1.18.217.1 Nectria haematococca e_gw1.18.217.1 I 0.000
FFUJ_04434 Fusarium fujikuroi FFUJ_04434 I 0.000
fgeneshPB_pg.72__18 Phycomyces blakesleeanus fgeneshPB_pg.72__18 N 0.000
fgeneshPB_pg.9__341 Phycomyces blakesleeanus fgeneshPB_pg.9__341 N 0.000
FGRRES_09565 Fusarium graminearum FGRRES_09565 I 0.000
FOXG_06266 Fusarium oxysporum FOXG_06266 I 0.000
FPSE_00936 Fusarium pseudograminearum FPSE_00936 I 0.000
FVEG_04118 Fusarium verticillioides FVEG_04118 I 0.000
GGTG_08766 Gaeumannomyces graminis GGTG_08766 I 0.000
MAPG_05020 Magnaporthe poae MAPG_05020 I 0.000
MGG_01840 Magnaporthe oryzae MGG_01840 I 0.000
MYCTH_2298578 Myceliophthora thermophila MYCTH_2298578 I 0.000
sre Neurospora crassa NCU07728 D 0.000
NechaG32931 Fusarium solani NechaG32931 I 0.000
NEUTE1DRAFT_59972 Neurospora tetrasperma NEUTE1DRAFT_59972 I 0.000
OCS_04920 Ophiocordyceps sinensis OCS_04920 I 0.000
PFICI_05672 Pestalotiopsis fici PFICI_05672 I 0.000
PODANS_6_1720 Podospora anserina PODANS_6_1720 I 0.000
RO3G_05737 Rhizopus oryzae RO3G_05737 N 0.000
RO3G_15635 Rhizopus oryzae RO3G_15635 N 0.000
SPPG_04393 Spizellomyces punctatus SPPG_04393 N 0.000
SPPG_06547 Spizellomyces punctatus SPPG_06547 N 0.000
THITE_2114956 Thielavia terrestris THITE_2114956 I 0.000
TRIATDRAFT_174504 Trichoderma atroviride TRIATDRAFT_174504 I 0.000
TRIREDRAFT_4231 Trichoderma reesei TRIREDRAFT_4231 I 0.000
TRIVIDRAFT_192933 Trichoderma virens TRIVIDRAFT_192933 I 0.000