Lus10035008.g (Linum usitatissimum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Lus10035008.g T321185_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.735 0.735
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.735 0.735
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10035008 RWP-RK 166 214

Links

Other RWP-RK family TFs
Other Linum usitatissimum TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA013533 Oryza indica BGIOSGA013533 N 0.000
Bo7g065640 Brassica oleracea Bo7g065640 N 0.000
Bra033690 Brassica rapa Bra033690 N 0.000
GRMZM2G301089 Zea mays GRMZM2G301089 N 0.000
GSMUA_Achr3G29320_001 Musa acuminata GSMUA_Achr3G29320_001 N 0.000
GSMUA_Achr4G11160_001 Musa acuminata GSMUA_Achr4G11160_001 N 0.000
LPERR03G28140 Leersia perrieri LPERR03G28140 N 0.000
MLOC_74977 Hordeum vulgare MLOC_74977 N 0.000
OBART03G33610 Oryza barthii OBART03G33610 N 0.000
OGLUM03G33270 Oryza glumaepatula OGLUM03G33270 N 0.000
OMERI03G31010 Oryza meridionalis OMERI03G31010 N 0.000
ONIVA10G02990 Oryza nivara ONIVA10G02990 N 0.000
ORGLA03G0304100 Oryza glaberrima ORGLA03G0304100 N 0.000
ORUFI03G34980 Oryza rufipogon ORUFI03G34980 N 0.000
BHLH148 Oryza sativa OS03G0741100 N 0.000
Pavir.J38335 Panicum virgatum Pavir.J38335 N 0.000
PDK_20s1685261g001 Phoenix dactylifera PDK_20s1685261g001 N 0.000
Si036716m.g Setaria italica Si036716m.g N 0.000
Traes_5BL_39FD9626E Triticum aestivum Traes_5BL_39FD9626E N 0.000
Traes_5DL_2A286B481 Triticum aestivum Traes_5DL_2A286B481 N 0.000