orange1.1g002144m.g (Citrus sinensis)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 orange1.1g002144m.g T321204_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.918 0.918
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.816 0.816
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g002144m RWP-RK 555 603
orange1.1g005290m RWP-RK 299 347
orange1.1g006537m RWP-RK 236 284

Links

Other RWP-RK family TFs
Other Citrus sinensis TFs

415 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CANTEDRAFT_121444 Candida tenuis CANTEDRAFT_121444 I
CaO19.13277 Candida albicans CaO19.13277 N
CD36_84050 Candida dubliniensis CD36_84050 N
CLUG_04253 Candida lusitaniae CLUG_04253 I
CLUG_04253 Clavispora lusitaniae CLUG_04253 I
CORT_0B04000 Candida orthopsilosis CORT_0B04000 I
CPAG_01786 Candida parapsilosis CPAG_01786 I
CPUR_06235 Claviceps purpurea CPUR_06235 I
CTRG_02642 Candida tropicalis CTRG_02642 I
DEHA2D07436g Debaryomyces hansenii DEHA2D07436g I
G210_3545 Candida maltosa G210_3545 N
GNLVRS01_PISO0A04598g Millerozyma farinosa GNLVRS01_PISO0A04598g I
GNLVRS01_PISO0B04687g Millerozyma farinosa GNLVRS01_PISO0B04687g I
MBR_03995 Metarhizium brunneum MBR_03995 I
PGUG_02437 Candida guilliermondii PGUG_02437 I
PGUG_02437 Meyerozyma guilliermondii PGUG_02437 I
PICST_34547 Scheffersomyces stipitis PICST_34547 I
PISMIDRAFT_26471 Pisolithus microcarpus PISMIDRAFT_26471 I
SPAPADRAFT_140662 Spathaspora passalidarum SPAPADRAFT_140662 I
TPHA_0B00880 Tetrapisispora phaffii TPHA_0B00880 I