orange1.1g002317m.g (Citrus sinensis)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 orange1.1g002317m.g T321205_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NLP4
M07248_2.00 		Arabidopsis thaliana
NNHNNBTGCTGYHNN
NNDRCAGCAVNNDNN		 Dap-seq
OMalley et al.(2016)
AtNLP4_col_b 		0.898 0.898
NLP7
M07251_2.00 		Arabidopsis thaliana
WNDTGNCYYTTSRDD
HHYSAARRGNCAHNW		 Dap-seq
OMalley et al.(2016)
NLP7_col_a 		0.878 0.878
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g002317m RWP-RK 620 668
orange1.1g002319m RWP-RK 620 668
orange1.1g002322m RWP-RK 620 668

Links

Other RWP-RK family TFs
Other Citrus sinensis TFs

416 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000016495 Ailuropoda melanoleuca ENSAMEG00000016495 N 0.000
ENSCAFG00000010704 Canis familiaris ENSCAFG00000010704 N 0.000
SP140 Callithrix jacchus ENSCJAG00000013289 N 0.000
SP140L Callithrix jacchus ENSCJAG00000035676 N 0.000
ENSCSAG00000006889 Chlorocebus sabaeus ENSCSAG00000006889 N 0.000
ENSCSAG00000006962 Chlorocebus sabaeus ENSCSAG00000006962 N 0.000
ENSECAG00000008186 Equus caballus ENSECAG00000008186 N 0.000
ENSECAG00000022252 Equus caballus ENSECAG00000022252 N 0.000
ENSETEG00000017626 Echinops telfairi ENSETEG00000017626 N 0.000
ENSFCAG00000002520 Felis catus ENSFCAG00000002520 N 0.000
SP140 Homo sapiens ENSG00000079263 N 0.000
SP140L Homo sapiens ENSG00000185404 N 0.000
SP140L Gorilla gorilla ENSGGOG00000002900 N 0.000
SP140 Gorilla gorilla ENSGGOG00000006936 N 0.000
ENSLAFG00000002303 Loxodonta africana ENSLAFG00000002303 N 0.000
ENSMICG00000015716 Microcebus murinus ENSMICG00000015716 N 0.000
SP140 Macaca mulatta ENSMMUG00000012199 N 0.000
SP100 Macaca mulatta ENSMMUG00000016575 N 0.000
ENSMMUP00000015997 Macaca fascicularis ENSMMUP00000015997 N 0.000
ENSMPUG00000004415 Mustela putorius furo ENSMPUG00000004415 N 0.000
ENSNLEG00000013760 Nomascus leucogenys ENSNLEG00000013760 N 0.000
ENSOARG00000020646 Ovis aries ENSOARG00000020646 N 0.000
ENSP00000375899-D1 Bos grunniens ENSP00000375899-D1 N 0.000
ENSPCAG00000005793 Procavia capensis ENSPCAG00000005793 N 0.000
ENSPPYG00000013253 Pongo abelii ENSPPYG00000013253 N 0.000
SP140 Pan troglodytes ENSPTRG00000013010 N 0.000
SP140L Pan troglodytes ENSPTRG00000013011 N 0.000
ENSPVAG00000003175 Pteropus vampyrus ENSPVAG00000003175 N 0.000
SP140 Sus scrofa ENSSSCG00000016262 N 0.000
ENSSTOG00000005247 Ictidomys tridecemlineatus ENSSTOG00000005247 N 0.000
ENSTBEG00000011553 Tupaia belangeri ENSTBEG00000011553 N 0.000
SP140 Tursiops truncatus ENSTTRG00000009293 N 0.000
ENSVPAG00000011666 Vicugna pacos ENSVPAG00000011666 N 0.000
Myotis_brandtii_SP140_10013554 Myotis brandtii Myotis_brandtii_SP140_10013554 N 0.000