Pavir.Ga01021 (Panicum virgatum)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02042 (RWP-RK) IPR003035 Pavir.Ga01021 T321225_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ga01021.1.p RWP-RK 202 250

Links

Other RWP-RK family TFs
Other Panicum virgatum TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA014540 Oryza indica BGIOSGA014540 N 0.918
BRADI5G18430 Brachypodium distachyon BRADI5G18430 N 0.959
F775_07886 Aegilops tauschii F775_07886 N 0.857
F775_08955 Aegilops tauschii F775_08955 N 0.857
GRMZM2G057131 Zea mays GRMZM2G057131 N 0.939
GRMZM2G472589 Zea mays GRMZM2G472589 N 0.793
LPERR04G17810 Leersia perrieri LPERR04G17810 N 0.837
MLOC_11130 Hordeum vulgare MLOC_11130 N 0.878
OB04G28790 Oryza brachyantha OB04G28790 N 0.898
OBART04G21780 Oryza barthii OBART04G21780 N 0.918
OGLUM04G21810 Oryza glumaepatula OGLUM04G21810 N 0.918
OLONG_013577 Oryza longistaminata OLONG_013577 N 0.918
OMERI04G18340 Oryza meridionalis OMERI04G18340 N 0.918
ONIVA04G20320 Oryza nivara ONIVA04G20320 N 0.918
OPUNC04G19530 Oryza punctata OPUNC04G19530 N 0.918
ORGLA04G0188200 Oryza glaberrima ORGLA04G0188200 N 0.918
ORUFI09G04820 Oryza rufipogon ORUFI09G04820 N 0.918
OS04G0564000 Oryza sativa OS04G0564000 N 0.918
Pavir.J21884 Panicum virgatum Pavir.J21884 N 0.959
Sb06g025420 Sorghum bicolor Sb06g025420 N 0.898
Si010837m.g Setaria italica Si010837m.g N 1.000
Si012648m.g Setaria italica Si012648m.g N 0.878
Traes_2AL_39432DCB1 Triticum aestivum Traes_2AL_39432DCB1 N 0.857
Traes_2AL_BC4CD296F Triticum aestivum Traes_2AL_BC4CD296F N 0.837
Traes_2BL_7BC3DF5C7 Triticum aestivum Traes_2BL_7BC3DF5C7 N 0.837
Traes_2BL_E8D551BE0 Triticum aestivum Traes_2BL_E8D551BE0 N 0.878
Traes_2DL_92641C6CC Triticum aestivum Traes_2DL_92641C6CC N 0.857
Traes_2DL_D8AD25F43 Triticum aestivum Traes_2DL_D8AD25F43 N 0.857
TRIUR3_21912 Triticum urartu TRIUR3_21912 N 0.857
TRIUR3_21913 Triticum urartu TRIUR3_21913 N 0.837