POPTR_0016s08890 (Populus trichocarpa)
S1FA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04689 (S1FA) IPR006779 POPTR_0016s08890 T321425_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
S1FA3
M07252_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
AT3G09735_col_a 		0.818 0.818
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0016s08890.1 S1FA 24 89

Links

Other S1FA family TFs
Other Populus trichocarpa TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BAUCODRAFT_152155 Baudoinia compniacensis BAUCODRAFT_152155 N 0.000
COCC4DRAFT_69368 Bipolaris maydis COCC4DRAFT_69368 N 0.000
COCCADRAFT_97412 Bipolaris zeicola COCCADRAFT_97412 N 0.000
COCMIDRAFT_95290 Bipolaris oryzae COCMIDRAFT_95290 N 0.000
COCSADRAFT_173949 Bipolaris sorokiniana COCSADRAFT_173949 N 0.000
COCVIDRAFT_96245 Bipolaris victoriae COCVIDRAFT_96245 N 0.000
estExt_fgenesh1_pm.C_60144 Cochliobolus heterostrophus C5 estExt_fgenesh1_pm.C_60144 N 0.000
fgeneshPB_pg.5__382 Phycomyces blakesleeanus fgeneshPB_pg.5__382 N 0.000
H072_10515 Dactylellina haptotyla H072_10515 N 0.000
PAN0_021d6001 Pseudozyma antarctica PAN0_021d6001 N 0.000
PHSY_002538 Pseudozyma hubeiensis PHSY_002538 N 0.000
PTRG_00913 Pyrenophora triticirepentis PTRG_00913 N 0.000
SETTUDRAFT_156877 Setosphaeria turcica SETTUDRAFT_156877 N 0.000
SNOG_07097 Phaeosphaeria nodorum SNOG_07097 N 0.000
SNOG_07097 Stagonospora nodorum SNOG_07097 N 0.000
sr13168 Sporisorium reilianum sr13168 N 0.000
UHOR_03263 Ustilago hordei UHOR_03263 N 0.000
UM06278 Ustilago maydis UM06278 N 0.000