fgenesh2_pg.scaffold_59000072 (Branchiostoma floridae)
SAND

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01342 (SAND) IPR000770 fgenesh2_pg.scaffold_59000072 T322202_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DEAF1
M11266_2.00 		Pan troglodytes Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEAF1_01 		0.882 0.680
DEAF1
M11267_2.00 		Pan troglodytes Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DEAF1_02 		0.882 0.680
For this family, TFs with SR scores > 0.843 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_pg.scaffold_59000072 SAND 139 213

Links

Other SAND family TFs
Other Branchiostoma floridae TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh2_pg.C_10050001 Branchiostoma floridae estExt_fgenesh2_pg.C_10050001 N
estExt_fgenesh2_pg.C_10050002 Branchiostoma floridae estExt_fgenesh2_pg.C_10050002 N
estExt_fgenesh2_pg.C_10050003 Branchiostoma floridae estExt_fgenesh2_pg.C_10050003 N
estExt_fgenesh2_pg.C_1010105 Branchiostoma floridae estExt_fgenesh2_pg.C_1010105 N
estExt_fgenesh2_pg.C_1360008 Branchiostoma floridae estExt_fgenesh2_pg.C_1360008 N
estExt_fgenesh2_pg.C_160025 Branchiostoma floridae estExt_fgenesh2_pg.C_160025 N
estExt_fgenesh2_pg.C_2150032 Branchiostoma floridae estExt_fgenesh2_pg.C_2150032 N
estExt_fgenesh2_pg.C_460129 Branchiostoma floridae estExt_fgenesh2_pg.C_460129 N
estExt_fgenesh2_pg.C_520015 Branchiostoma floridae estExt_fgenesh2_pg.C_520015 N
estExt_fgenesh2_pg.C_5580012 Branchiostoma floridae estExt_fgenesh2_pg.C_5580012 N
estExt_fgenesh2_pg.C_5860001 Branchiostoma floridae estExt_fgenesh2_pg.C_5860001 N
estExt_fgenesh2_pg.C_7160018 Branchiostoma floridae estExt_fgenesh2_pg.C_7160018 N
estExt_fgenesh2_pg.C_7360007 Branchiostoma floridae estExt_fgenesh2_pg.C_7360007 N
estExt_fgenesh2_pg.C_750143 Branchiostoma floridae estExt_fgenesh2_pg.C_750143 N
fgenesh2_pg.scaffold_1639000001 Branchiostoma floridae fgenesh2_pg.scaffold_1639000001 N
fgenesh2_pg.scaffold_268000051 Branchiostoma floridae fgenesh2_pg.scaffold_268000051 N
fgenesh2_pg.scaffold_308000052 Branchiostoma floridae fgenesh2_pg.scaffold_308000052 N
fgenesh2_pg.scaffold_32000031 Branchiostoma floridae fgenesh2_pg.scaffold_32000031 N
fgenesh2_pg.scaffold_32000086 Branchiostoma floridae fgenesh2_pg.scaffold_32000086 N
fgenesh2_pg.scaffold_354000013 Branchiostoma floridae fgenesh2_pg.scaffold_354000013 N
fgenesh2_pg.scaffold_354000015 Branchiostoma floridae fgenesh2_pg.scaffold_354000015 N
fgenesh2_pg.scaffold_440000023 Branchiostoma floridae fgenesh2_pg.scaffold_440000023 N
fgenesh2_pg.scaffold_55000119 Branchiostoma floridae fgenesh2_pg.scaffold_55000119 N
fgenesh2_pg.scaffold_55000124 Branchiostoma floridae fgenesh2_pg.scaffold_55000124 N
fgenesh2_pg.scaffold_58000023 Branchiostoma floridae fgenesh2_pg.scaffold_58000023 N
fgenesh2_pg.scaffold_624000032 Branchiostoma floridae fgenesh2_pg.scaffold_624000032 N
fgenesh2_pg.scaffold_72000003 Branchiostoma floridae fgenesh2_pg.scaffold_72000003 N