Bo7g049950 (Brassica oleracea)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 Bo7g049950 T322449_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL10
M01084_2.00 		Arabidopsis thaliana
NNGTACGRHN
NDYCGTACNN		 PBM
Sullivan et al.(2014)
pTH9749 		0.979 0.933
SPL11
M02471_2.00 		Arabidopsis thaliana
NNNHGTACGGWN
NWCCGTACDNNN		 PBM
Weirauch et al.(2014)
pTH9392 		0.977 0.933
SPL11
M07254_2.00 		Arabidopsis thaliana
HTGTACTDDHH
DDHHAGTACAD		 Dap-seq
OMalley et al.(2016)
SPL11_col100_a 		0.977 0.933
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g049950.1 SBP 167 241

Links

Other SBP family TFs
Other Brassica oleracea TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL009609 Aedes aegypti AAEL009609 N
AAEL014143 Aedes aegypti AAEL014143 N
AALB005681 Anopheles albimanus AALB005681 N
Aan_R002107 Calypte anna Aan_R002107 I
AARA007588 Anopheles arabiensis AARA007588 N
ACHR009157 Anopheles christyi ACHR009157 N
ACOM024924 Anopheles coluzzii ACOM024924 N
ACUA004415 Anopheles culicifacies ACUA004415 N
ADIR003886 Anopheles dirus ADIR003886 N
AEPI010862 Anopheles epiroticus AEPI010862 N
AFAF019115 Anopheles farauti AFAF019115 N
AFUN004771 Anopheles funestus AFUN004771 N
AGAP005930 Anopheles gambiae AGAP005930 N
AMAM008816 Anopheles maculatus AMAM008816 N
AMEC000297 Anopheles melas AMEC000297 N
AMEC017519 Anopheles melas AMEC017519 N
AMEM005482 Anopheles merus AMEM005482 N
AMIN010696 Anopheles minimus AMIN010696 N
AQUA005579 Anopheles quadriannulatus AQUA005579 N
ASIS001372 Anopheles sinensis ASIS001372 N
ASTEI02773 Anopheles stephensi ASTEI02773 N
BGIBMGA004680 Bombyx mori BGIBMGA004680 N
CLEC009121 Cimex lectularius CLEC009121 N
Cmyd_10017645 Chelonia mydas Cmyd_10017645 I
CpipJ_CPIJ009873 Culex pipiens CpipJ_CPIJ009873 I
ENSAMEG00000015618 Ailuropoda melanoleuca ENSAMEG00000015618 I
NEUROG2 Bos taurus ENSBTAG00000015259 I
NEUROG2 Canis familiaris ENSCAFG00000025325 I
NEUROG2 Choloepus hoffmanni ENSCHOG00000000513 I
NEUROG2 Callithrix jacchus ENSCJAG00000003772 I
ENSCSAG00000000399 Chlorocebus sabaeus ENSCSAG00000000399 I
NEUROG2 Dasypus novemcinctus ENSDNOG00000010840 I
NEUROG3 Echinops telfairi ENSETEG00000015577 I
NEUROG2 Felis catus ENSFCAG00000010711 I
NEUROG2 Homo sapiens ENSG00000178403 D
NEUROG2 Gorilla gorilla ENSGGOG00000017054 I
ENSLACG00000002633 Latimeria chalumnae ENSLACG00000002633 I
ENSMEUG00000001133 Macropus eugenii ENSMEUG00000001133 I
NEUROG2 Macaca mulatta ENSMMUG00000014078 I
NEUROG2 Monodelphis domestica ENSMODG00000005712 I
ENSMODG00000014458 Monodelphis domestica ENSMODG00000014458 I
ENSMPUG00000019178 Mustela putorius furo ENSMPUG00000019178 I
Neurog2 Mus musculus ENSMUSG00000027967 D
ENSNLEG00000016424 Nomascus leucogenys ENSNLEG00000016424 I
NEUROG1 Ornithorhynchus anatinus ENSOANG00000003865 I
ENSOARG00000000293 Ovis aries ENSOARG00000000293 I
NEUROG2 Oryctolagus cuniculus ENSOCUG00000007063 I
NEUROG2 Otolemur garnettii ENSOGAG00000029479 I
ENSP00000317333-D1 Bos grunniens ENSP00000317333-D1 I
ENSPANG00000004407 Papio anubis ENSPANG00000004407 I
ENSPPYG00000015008 Pongo abelii ENSPPYG00000015008 I
NEUROG2 Pan troglodytes ENSPTRG00000016376 I
Neurog2 Rattus norvegicus ENSRNOG00000010972 I
ENSSHAG00000006703 Sarcophilus harrisii ENSSHAG00000006703 I
ENSSTOG00000011758 Ictidomys tridecemlineatus ENSSTOG00000011758 I
ENSTSYG00000001849 Tarsius syrichta ENSTSYG00000001849 I
HHAL003570-PA Halyomorpha halys HHAL003570-PA N
KGM_19443 Danaus plexippus KGM_19443 N
L798_14901 Zootermopsis nevadensis L798_14901 N
MCINX001572 Melitaea cinxia MCINX001572 N
PPAI004034 Phlebotomus papatasi PPAI004034 N
RPRC013552 Rhodnius prolixus RPRC013552 N
TC013793 Tribolium castaneum TC013793 I
neurog2.L Xenopus laevis XB-GENE-6077660 I
YQE_06248 Dendroctonus ponderosae YQE_06248 N