MLOC_13032 (Hordeum vulgare)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 MLOC_13032 T322714_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK22320.1
M02483_2.00 		Cannabis sativa
NNGTACGGNN
NNCCGTACNN		 PBM
Weirauch et al.(2014)
pTH9723 		0.938 0.800
SPL4
M02472_2.00 		Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN		 PBM
Weirauch et al.(2014)
pTH7408 		0.916 0.760
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.915 0.747
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.913 0.720
SPL14
M02470_2.00 		Arabidopsis thaliana
NNNRTACNN
NNGTAYNNN		 PBM
Weirauch et al.(2014)
pTH8191 		0.904 0.693
SPL14
M07253_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL14_col_a 		0.904 0.693
SPL14
M11270_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPL14_01 		0.904 0.693
POPTR_0002s00440
M02477_2.00 		Populus trichocarpa
NGTACGG
CCGTACN		 PBM
Weirauch et al.(2014)
pTH9280 		0.902 0.680
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.899 0.720
SPL5
M02474_2.00 		Arabidopsis thaliana
NNGTACGDN
NHCGTACNN		 PBM
Weirauch et al.(2014)
pTH7385 		0.896 0.747
SPL5
M07261_2.00 		Arabidopsis thaliana
NDNYGTACGGAH
DTCCGTACRNHN		 Dap-seq
OMalley et al.(2016)
SPL5_col_a 		0.896 0.747
SPL5
M07262_2.00 		Arabidopsis thaliana
NBGTACGGWH
DWCCGTACVN		 Dap-seq
OMalley et al.(2016)
SPL5_colamp_a 		0.896 0.747
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.895 0.720
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.895 0.720
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.895 0.720
AT1G76580
M02473_2.00 		Arabidopsis thaliana
NNNRTAYNNN
NNNRTAYNNN		 PBM
Weirauch et al.(2014)
pTH8668 		0.892 0.680
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_13032.1 SBP 86 160

Links

Other SBP family TFs
Other Hordeum vulgare TFs

444 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009185 Calypte anna Aan_R009185 I
Afo_R007523 Aptenodytes forsteri Afo_R007523 I
Alligator_sinensis_CCG009047.1 Alligator sinensis Alligator_sinensis_CCG009047.1 I
Brh_R003401 Buceros rhinoceros Brh_R003401 I
Cmyd_10016754 Chelonia mydas Cmyd_10016754 I
ZNF276 Anolis carolinensis ENSACAG00000008103 I
ENSAMEG00000001273 Ailuropoda melanoleuca ENSAMEG00000001273 I
ENSAMXG00000015046 Astyanax mexicanus ENSAMXG00000015046 I
ENSAPLG00000006256 Anas platyrhynchos ENSAPLG00000006256 I
ZNF276 Bos taurus ENSBTAG00000001904 I
ZNF276 Canis familiaris ENSCAFG00000019816 I
ZNF276 Callithrix jacchus ENSCJAG00000010721 I
ENSCSAG00000002787 Chlorocebus sabaeus ENSCSAG00000002787 I
ZNF276 Dasypus novemcinctus ENSDNOG00000001856 I
ENSDORG00000012257 Dipodomys ordii ENSDORG00000012257 I
ZNF276 Equus caballus ENSECAG00000019563 I
ENSEEUG00000012574 Erinaceus europaeus ENSEEUG00000012574 I
ENSETEG00000007978 Echinops telfairi ENSETEG00000007978 I
ENSFALG00000003070 Ficedula albicollis ENSFALG00000003070 I
ZNF276 Felis catus ENSFCAG00000003794 I
ZNF276 Homo sapiens ENSG00000158805 D
ZNF276 Gasterosteus aculeatus ENSGACG00000002104 I
ZNF276 Gallus gallus ENSGALG00000000513 I
ZNF276 Gorilla gorilla ENSGGOG00000010960 I
ENSGMOG00000003784 Gadus morhua ENSGMOG00000003784 I
ZNF276 Loxodonta africana ENSLAFG00000018198 I
ENSLOCG00000002928 Lepisosteus oculatus ENSLOCG00000002928 I
ENSMEUG00000001901 Macropus eugenii ENSMEUG00000001901 I
ZNF276 Meleagris gallopavo ENSMGAG00000008195 I
ZNF276 Microcebus murinus ENSMICG00000003291 I
ZNF276 Myotis lucifugus ENSMLUG00000013641 I
ZNF276 Macaca mulatta ENSMMUG00000002506 I
ENSMMUP00000003371 Macaca fascicularis ENSMMUP00000003371 I
ZNF276 Monodelphis domestica ENSMODG00000003479 I
ENSMPUG00000007237 Mustela putorius furo ENSMPUG00000007237 I
Zfp276 Mus musculus ENSMUSG00000001065 I
ENSNLEG00000015731 Nomascus leucogenys ENSNLEG00000015731 I
ZNF276 Ornithorhynchus anatinus ENSOANG00000004837 I
ENSOARG00000014354 Ovis aries ENSOARG00000014354 I
ZNF276 Oryctolagus cuniculus ENSOCUG00000008960 I
ZNF276 Otolemur garnettii ENSOGAG00000004891 I
ENSONIG00000010959 Oreochromis niloticus ENSONIG00000010959 I
ZNF276 Ochotona princeps ENSOPRG00000016172 I
ZNF276 Oryzias latipes ENSORLG00000015289 I
ENSP00000415836-D1 Bos grunniens ENSP00000415836-D1 I
ENSPANG00000022228 Papio anubis ENSPANG00000022228 I
ZNF276 Procavia capensis ENSPCAG00000001610 I
ENSPFOG00000011742 Poecilia formosa ENSPFOG00000011742 I
ENSPPYG00000007673 Pongo abelii ENSPPYG00000007673 I
ENSPSIG00000009997 Pelodiscus sinensis ENSPSIG00000009997 I
ZNF276 Pan troglodytes ENSPTRG00000008487 I
Zfp276 Rattus norvegicus ENSRNOG00000016631 I
ZNF276 Sorex araneus ENSSARG00000003731 I
ENSSHAG00000006045 Sarcophilus harrisii ENSSHAG00000006045 I
ZNF276 Sus scrofa ENSSSCG00000029228 I
ENSSTOG00000013982 Ictidomys tridecemlineatus ENSSTOG00000013982 I
ZNF276 Taeniopygia guttata ENSTGUG00000007961 I
ZNF276 Tetraodon nigroviridis ENSTNIG00000008839 I
ZNF276 Takifugu rubripes ENSTRUG00000005087 I
ZNF276 Tursiops truncatus ENSTTRG00000004416 I
ENSXMAG00000002903 Xiphophorus maculatus ENSXMAG00000002903 I
Gfo_R000535 Geospiza fortis Gfo_R000535 I
Myotis_brandtii_ZNF276_10003797 Myotis brandtii Myotis_brandtii_ZNF276_10003797 I
Ogr16798 Ophisaurus gracilis Ogr16798 I
Pvit_16300 Pogona vitticeps Pvit_16300 I
znf276 Xenopus tropicalis XB-GENE-983669 I
znf276.S Xenopus laevis XB-GENE-983672 I