Si010262m.g (Setaria italica)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 Si010262m.g T323043_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.906 0.733
SPL4
M02472_2.00 		Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN		 PBM
Weirauch et al.(2014)
pTH7408 		0.904 0.707
SPL14
M02470_2.00 		Arabidopsis thaliana
NNNRTACNN
NNGTAYNNN		 PBM
Weirauch et al.(2014)
pTH8191 		0.900 0.693
SPL14
M07253_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL14_col_a 		0.900 0.693
SPL14
M11270_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPL14_01 		0.900 0.693
POPTR_0002s00440
M02477_2.00 		Populus trichocarpa
NGTACGG
CCGTACN		 PBM
Weirauch et al.(2014)
pTH9280 		0.899 0.667
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.893 0.707
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.891 0.680
AT1G76580
M02473_2.00 		Arabidopsis thaliana
NNNRTAYNNN
NNNRTAYNNN		 PBM
Weirauch et al.(2014)
pTH8668 		0.889 0.680
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.887 0.693
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.887 0.693
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.887 0.693
PK22320.1
M02483_2.00 		Cannabis sativa
NNGTACGGNN
NNCCGTACNN		 PBM
Weirauch et al.(2014)
pTH9723 		0.886 0.720
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si010262m SBP 125 199

Links

Other SBP family TFs
Other Setaria italica TFs

381 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL017280 Aedes aegypti AAEL017280 N 0.000
ACEP26642 Atta cephalotes ACEP26642 N 0.000
AFAF010393 Anopheles farauti AFAF010393 N 0.000
AFUN009891 Anopheles funestus AFUN009891 N 0.000
AMEM013442 Anopheles merus AMEM013442 N 0.000
ANCCAN_09492 Ancylostoma caninum ANCCAN_09492 N 0.000
ANCCEY_03110 Ancylostoma ceylanicum ANCCEY_03110 N 0.000
ANCDUO_04788 Ancylostoma duodenale ANCDUO_04788 N 0.000
ASTEI11512 Anopheles stephensi ASTEI11512 N 0.000
augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0 I 0.000
BGIBMGA010273 Bombyx mori BGIBMGA010273 N 0.000
Bm1891 Brugia malayi Bm1891 N 0.000
BTMF_0001195401 Brugia timori BTMF_0001195401 N 0.000
BXY_0663500 Bursaphelenchus xylophilus BXY_0663500 N 0.000
CBG12337 Caenorhabditis briggsae CBG12337 N 0.000
CBN07938 Caenorhabditis brenneri CBN07938 N 0.000
Cflo_01219--XP_395512.3_APIME Camponotus floridanus Cflo_01219--XP_395512.3_APIME N 0.000
CJA11729 Caenorhabditis japonica CJA11729 N 0.000
CLEC012210 Cimex lectularius CLEC012210 N 0.000
CRE29533 Caenorhabditis remanei CRE29533 N 0.000
D917_06367 Trichinella nativa D917_06367 N 0.000
D918_04368 Trichuris suis D918_04368 N 0.000
DME_0001005001 Dracunculus medinensis DME_0001005001 N 0.000
EEL_0001008901 Elaeophora elaphi EEL_0001008901 N 0.000
EFV52694 Trichinella spiralis EFV52694 N 0.000
EVEC_0000024601 Enterobius vermicularis EVEC_0000024601 N 0.000
osa Drosophila yakuba FBgn0041640 N 0.000
GF23141 Drosophila ananassae FBgn0100135 N 0.000
GG16758 Drosophila erecta FBgn0108988 N 0.000
GH15872 Drosophila grimshawi FBgn0123343 N 0.000
GI23637 Drosophila mojavensis FBgn0146363 N 0.000
GM15347 Drosophila sechellia FBgn0170267 N 0.000
GJ24712 Drosophila virilis FBgn0211788 N 0.000
GK22507 Drosophila willistoni FBgn0224484 N 0.000
GA26236 Drosophila pseudoobscura FBgn0247610 N 0.000
osa Drosophila melanogaster FBgn0261885 N 0.000
GB44899 Apis mellifera GB44899 N 0.000
GPLIN_000077900 Globodera pallida GPLIN_000077900 N 0.000
GPUH_0000112301 Gongylonema pulchrum GPUH_0000112301 N 0.000
HCOI00324200 Haemonchus contortus HCOI00324200 N 0.000
HHAL005964-PA Halyomorpha halys HHAL005964-PA N 0.000
HPBE_0000983501 Heligmosomoides bakeri HPBE_0000983501 N 0.000
HPLM_0000291901 Haemonchus placei HPLM_0000291901 N 0.000
Hsal_01939--XP_395512.3_APIME Harpegnathos saltator Hsal_01939--XP_395512.3_APIME N 0.000
ISCW014189 Ixodes scapularis ISCW014189 I 0.000
KGM_12579 Danaus plexippus KGM_12579 N 0.000
L596_g4117 Steinernema carpocapsae L596_g4117 N 0.000
L889_g180 Steinernema feltiae L889_g180 N 0.000
L892_g19705 Steinernema scapterisci L892_g19705 N 0.000
L893_g29191 Steinernema glaseri L893_g29191 N 0.000
L898_g7337 Steinernema monticolum L898_g7337 N 0.000
LCUP015823 Lucilia cuprina LCUP015823 N 0.000
LDEC011073 Leptinotarsa decemlineata LDEC011073 I 0.000
LOAG_17326 Loa loa LOAG_17326 N 0.000
MhA1_Contig163.frz3.gene26 Meloidogyne hapla MhA1_Contig163.frz3.gene26 I 0.000
nAv.1.0.1.g00338 Acanthocheilonema viteae nAv.1.0.1.g00338 N 0.000
NBR_0002081701 Nippostrongylus brasiliensis NBR_0002081701 N 0.000
nDi.2.2.2.g04479 Dirofilaria immitis nDi.2.2.2.g04479 N 0.000
NECAME_01002 Necator americanus NECAME_01002 N 0.000
nLs.2.1.2.g09434 Litomosoides sigmodontis nLs.2.1.2.g09434 N 0.000
nOo.2.0.1.g08403 Onchocerca ochengi nOo.2.0.1.g08403 N 0.000
OESDEN_04600 Oesophagostomum dentatum OESDEN_04600 N 0.000
OFLC_0001383401 Onchocerca flexuosa OFLC_0001383401 N 0.000
PEQ_0000742201 Parascaris equorum PEQ_0000742201 N 0.000
PHUM080380 Pediculus humanus PHUM080380 N 0.000
PPA05721 Pristionchus pacificus PPA05721 N 0.000
PPAI002183 Phlebotomus papatasi PPAI002183 N 0.000
PTRK_0001699800 Parastrongyloides trichosuri PTRK_0001699800 N 0.000
RSKR_0000271300 Rhabditophanes kr3021 RSKR_0000271300 N 0.000
SBAD_0000668001 Soboliphyme baturini SBAD_0000668001 N 0.000
scaffold2015-EXSNAP2012.2 Pristionchus exspectatus scaffold2015-EXSNAP2012.2 N 0.000
SINV22763 Solenopsis invicta SINV22763 N 0.000
SMAR003184 Strigamia maritima SMAR003184 I 0.000
SMAR006121 Strigamia maritima SMAR006121 I 0.000
SPAL_0001124500 Strongyloides papillosus SPAL_0001124500 N 0.000
SSTP_0000977600 Strongyloides stercoralis SSTP_0000977600 N 0.000
SVE_1830100 Strongyloides venezuelensis SVE_1830100 N 0.000
TC013586 Tribolium castaneum TC013586 N 0.000
TCLT_0000619901 Thelazia callipaeda TCLT_0000619901 N 0.000
TCNE_0000128301 Toxocara canis TCNE_0000128301 N 0.000
TELCIR_03263 Teladorsagia circumcincta TELCIR_03263 N 0.000
TMUE_s0224000200 Trichuris muris TMUE_s0224000200 N 0.000
let-526 Caenorhabditis elegans WBGene00002717 N 0.000
WUBG_00477 Wuchereria bancrofti WUBG_00477 N 0.000
YQE_09239 Dendroctonus ponderosae YQE_09239 N 0.000