Ca_18591 (Cicer arietinum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Ca_18591 T323175_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
POPTR_0002s00440
M02477_2.00 		Populus trichocarpa
NGTACGG
CCGTACN		 PBM
Weirauch et al.(2014)
pTH9280 		0.978 0.853
SPL14
M02470_2.00 		Arabidopsis thaliana
NNNRTACNN
NNGTAYNNN		 PBM
Weirauch et al.(2014)
pTH8191 		0.977 0.853
SPL14
M07253_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL14_col_a 		0.977 0.853
SPL14
M11270_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPL14_01 		0.977 0.853
AT1G76580
M02473_2.00 		Arabidopsis thaliana
NNNRTAYNNN
NNNRTAYNNN		 PBM
Weirauch et al.(2014)
pTH8668 		0.975 0.840
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.975 0.813
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.971 0.907
PRUPE_ppa000682mg
M02478_2.00 		Prunus persica
NNNNGTACGD
HCGTACNNNN		 PBM
Weirauch et al.(2014)
pTH9281 		0.968 0.827
SPL1
M00887_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Franco-Zorrilla et al.(2014)
SPL1 		0.962 0.813
SPL1
M07259_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL1_col_a 		0.962 0.813
SPL1
M07260_2.00 		Arabidopsis thaliana
NNGTACGKWH
DWMCGTACNN		 Dap-seq
OMalley et al.(2016)
SPL1_colamp_a 		0.962 0.813
SPL4
M02472_2.00 		Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN		 PBM
Weirauch et al.(2014)
pTH7408 		0.960 0.720
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.953 0.760
PK22320.1
M02483_2.00 		Cannabis sativa
NNGTACGGNN
NNCCGTACNN		 PBM
Weirauch et al.(2014)
pTH9723 		0.953 0.707
SPL5
M02474_2.00 		Arabidopsis thaliana
NNGTACGDN
NHCGTACNN		 PBM
Weirauch et al.(2014)
pTH7385 		0.953 0.707
SPL5
M07261_2.00 		Arabidopsis thaliana
NDNYGTACGGAH
DTCCGTACRNHN		 Dap-seq
OMalley et al.(2016)
SPL5_col_a 		0.953 0.707
SPL5
M07262_2.00 		Arabidopsis thaliana
NBGTACGGWH
DWCCGTACVN		 Dap-seq
OMalley et al.(2016)
SPL5_colamp_a 		0.953 0.707
SPL3
M07255_2.00 		Arabidopsis thaliana
NGTACGGA
TCCGTACN		 Dap-seq
OMalley et al.(2016)
SPL3_col_a 		0.929 0.693
SPL3
M07256_2.00 		Arabidopsis thaliana
NDNTGTACGGAHN
NDTCCGTACANHN		 Dap-seq
OMalley et al.(2016)
SPL3_colamp_a 		0.929 0.693
SPL3
M02715_2.00 		Arabidopsis thaliana
DDDDDNGTACGKHHHH
DDDDMCGTACNHHHHH		 SELEX
Mathelier et al.(2014)
MA0577.1 		0.929 0.693
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.911 0.667
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_18591 SBP 144 218

Links

Other SBP family TFs
Other Cicer arietinum TFs

511 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF274 Bos taurus ENSBTAG00000013353 I
ZNF544 Callithrix jacchus ENSCJAG00000000329 I
ENSCSAG00000019664 Chlorocebus sabaeus ENSCSAG00000019664 I
ZNF274 Dasypus novemcinctus ENSDNOG00000032910 I
ZNF274 Equus caballus ENSECAG00000007526 I
ZNF274 Erinaceus europaeus ENSEEUG00000008228 I
ZNF274 Homo sapiens ENSG00000171606 D
ZNF274 Gorilla gorilla ENSGGOG00000004688 I
ZNF274 Microcebus murinus ENSMICG00000017855 I
ZNF274 Macaca mulatta ENSMMUG00000020505 I
ENSMPUG00000008378 Mustela putorius furo ENSMPUG00000008378 I
Zfp110 Mus musculus ENSMUSG00000058638 I
ENSNLEG00000011103 Nomascus leucogenys ENSNLEG00000011103 I
ZNF274 Otolemur garnettii ENSOGAG00000005637 I
ZNF274 Ochotona princeps ENSOPRG00000007383 I
ENSP00000409872 Macaca fascicularis ENSP00000409872 I
ENSPANG00000012245 Papio anubis ENSPANG00000012245 I
ENSPPYG00000010493 Pongo abelii ENSPPYG00000010493 I
ZNF274 Pan troglodytes ENSPTRG00000011583 I
ZNF274 Pteropus vampyrus ENSPVAG00000002938 I
Zfp110 Rattus norvegicus ENSRNOG00000031328 I
ZNF274 Sus scrofa ENSSSCG00000003998 I
ZNF274 Tupaia belangeri ENSTBEG00000006394 I
ENSTSYG00000010913 Tarsius syrichta ENSTSYG00000010913 I
ZNF274 Tursiops truncatus ENSTTRG00000013077 I
Myotis_brandtii_ZNF274_10003422 Myotis brandtii Myotis_brandtii_ZNF274_10003422 I